| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1714 |
|---|
| Symbol | |
|---|
| ID | 4028822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1951544 |
|---|
| End bp | 1952995 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637966902 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_573765 |
|---|
| Protein GI | 92113837 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0396788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGACG CGTTCGAGGA GTCAACCTTG CTGATTCGCT ATACCGCTTA TTACGGCTTG
GCGCGGGGTG TGCCGGGGCT GCTGAATTTC CTGGCGATCG CGATCTACAC CCGGCTGCTG
TCCCCCAGCG ACTACGGGAT CTACGCCCTG GTCGTGGTGT GGGTGGGGTT GGTCAATGTG
GTGTGTTTTC AGTGGATCCG GCTGTCGCTG CTGCGCTTCT TTCCGGCACA TCTGGAAGCG
CCGCAGCGCC TGTTGAGTAC CTTGCTGCTG GCCTATACCA GCGTGGCGTT GCTCACCGGT
GTGGCGGGTG TAGGCGTGTT GCTGACGGTG AGCGATCCCG CGCTGCGTTC GCTGGTGTTC
ATCGCGGTAC CGCTGGTGTG GGTGCAGGCC GGCTTCGAAC TCAGTCTCGA ACTGATGCGC
AGTCAGCTCA ACCCGTTGCG CTACGGCCTG ATGGCGGGCG TGCGGGCGAT CATCGCGCTG
GGCCTGGGCG TGTTGTTGAT CACCTGGGGC TTCGGCGCCT TCGGGCCTTT GGTAGCGATG
CTGGTGGGCA TGCTCGTCGC CGTGGTGACG CTGGGAGCGT CGCTGTGGCG GGGAGCGCGC
CCATCGCTGA CGCTGATGCC GGACTTGAAG CCGCTGCTGG TCTACGGGCT GCCGCTGACC
GCGACCTTCG CGCTGGAATT CGTGGTCTCC AGCTCGGATC GCTTTCTGCT CGCGGCGTTG
CTGAACAACG AAGCGGTAGG GATCTACACC GCCGGCTATG ACCTGGTTGC GCATGTCATC
AATCTCTTGC TGGTGACGGT GAACCTGGCG GCGTATCCGC TGGTGGTGCG CGCGTTCGAG
CAGCATGGTC GCGAGGCCGC CCACGAACAG CTCGATCGCA ACGGCAGCCT GCTGCTGCTG
ATCGCGATTC CGGTGACGCT CGGTTTCATC GTGCTGGCGC CGCAGATCGT CGCCCTGATG
CTGGGCGAGG CGTTCCATGC CGGGGCCACG CAGCTGGTGC CGTGGGTCGC CCTGGCGATC
TTCATGTGCT GCATTCGCGC CTTCCATTTT GATCTGGCGT TCCAGTTGAG CGAGAAGACC
TTCTATCAGG TGTGGATCAA CGGCGGGGCG GCGCTGGTCA ACGTGGCGCT CAACCTGCTG
CTGATCCCGG CGTTCGGCCT GGTGGGAGCG GCCTACGCCA CGGTGATCGC GTACGGCGTG
GCGCTGGCGT TGAGCGTGTT GCTGGGACGA CGGCTGTTCG CGATCTCGCT GATCACGCGC
GACAACCTCA AGGTGCTGCT GAGCGGCGCC ATCATGGTGG CCTGCCTGTG GCCGCTGCGC
GAGGCGAGTG GTGCCTTGGC CCTGATGGAA CAGGTCCTGT GGGGAGCGAC GGTTTATACC
GTTAGCGCAT TTTCGATGAA CGTGGCGAAC GTGCGCGATC GCGTTTTCGC CAAGCGACGG
ACGGCCAAAT GA
|
|---|
| Protein sequence | MRDAFEESTL LIRYTAYYGL ARGVPGLLNF LAIAIYTRLL SPSDYGIYAL VVVWVGLVNV
VCFQWIRLSL LRFFPAHLEA PQRLLSTLLL AYTSVALLTG VAGVGVLLTV SDPALRSLVF
IAVPLVWVQA GFELSLELMR SQLNPLRYGL MAGVRAIIAL GLGVLLITWG FGAFGPLVAM
LVGMLVAVVT LGASLWRGAR PSLTLMPDLK PLLVYGLPLT ATFALEFVVS SSDRFLLAAL
LNNEAVGIYT AGYDLVAHVI NLLLVTVNLA AYPLVVRAFE QHGREAAHEQ LDRNGSLLLL
IAIPVTLGFI VLAPQIVALM LGEAFHAGAT QLVPWVALAI FMCCIRAFHF DLAFQLSEKT
FYQVWINGGA ALVNVALNLL LIPAFGLVGA AYATVIAYGV ALALSVLLGR RLFAISLITR
DNLKVLLSGA IMVACLWPLR EASGALALME QVLWGATVYT VSAFSMNVAN VRDRVFAKRR
TAK
|
|---|
| |