Gene Csal_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1475 
Symbol 
ID4028415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1674398 
End bp1675615 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content64% 
IMG OID637966658 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_573527 
Protein GI92113599 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCGAC TCAATGCGCG ACGTTTGGCG CTGCTGGTGG CGGCCAATAC CGCCCTGGCG 
CCTTTCGCCA TCGATGCCTA TCTACCCGCC ATGCCGACGC TCGCCGAGGC GGTGAACGCC
AGCGTGCATC ACACCGAGCT GTCGTTGAGC GTGTTCCTGT TCGGCTTCGC CATCGGCCAG
CTGCTGTGCG GCCCGCTGTC GGATCGCTTT GGCCGGCGTC CGGTGCTGTT GACCGGGCTG
GTGGTGTTTC TGGTCGCCAG TCTGGGCATC ATGCAGGTGT CGTCGCTGGA AACGCTCTGG
GGGCTGCGTT TCGTCCAGGC CCTGGGGGGC GGGGCCTGCG TGGTCAATTC CGCGGCCATC
GTGCGCGACT GTTTCAGCGG ACGCGAGGCC GCCAAGGTGA TGTCGACCAT GGCGATGATC
CTGATGCTCG CCCCGCTGGT GGCGCCCACG GTGGGAAGCG TGCTGCTGGG ATTCTTCAAC
TGGCAGTCGA TCTTTCTGTT CCTGGCGCTG TATGCCGCCT TCCTGCTGTT CTTTCTGGGC
ACGCGCCTGC CCGAGACCCA TGGGCGCGAT CCCGACGCAC CGTCGATGCG CCAGGTGTTG
CGCAACTATG CCAGCGTCAT TCGTCATCGC GAGGCGATGG GCTACATCTG CGCCGTGTCG
ATGTCGTTCG CGGGCATGTT TGCCTTCATC ACCGGGTCGC CGTACCTGTA CATGGAGCAC
TACGGCATTT CGGCGGCGGT CTATCCGTTC GTGTTCGGGG CCAACATCCT GGTCATGGCC
TCTTCCAACC GTCTCAACAT CTATCTGTTG AAGAGACGCA CGCCGCAGCA GAATCTCGTG
GTGGGGCTGG GCATTCAGTT ATGTGCCGGG GTGGCCCTGG TGGCGTTGAT CCTGTCGGGC
ATGGACTCGA TCTACAGCGT CGCGCCGCTG ATGGTGGTGT TCGTGGGCAT GCAGGGGTTG
ATCGCACCGA ACGCGATGTC CTCGATGCTC GATCACTTCC CGAACATGAG CGCGACGGCC
ACGGCGCTGC AAGGGTGTCT GCAATTTTCC AGCGGCGCCT TCGCCGGCAT GCTGGTGGGG
GCCTTCGAGA TCGCCAGTGC CTGGCCGACG GTACTGACGA TGCTGGGCGC TTCCTTGCTG
GGCAATATCG GCGTGCGGGT ACTGGCCGGT CGAGCCTTGG GGGCTCAGGA GGAAGAAGGG
GCAGTGACCG AACGGTAG
 
Protein sequence
MTRLNARRLA LLVAANTALA PFAIDAYLPA MPTLAEAVNA SVHHTELSLS VFLFGFAIGQ 
LLCGPLSDRF GRRPVLLTGL VVFLVASLGI MQVSSLETLW GLRFVQALGG GACVVNSAAI
VRDCFSGREA AKVMSTMAMI LMLAPLVAPT VGSVLLGFFN WQSIFLFLAL YAAFLLFFLG
TRLPETHGRD PDAPSMRQVL RNYASVIRHR EAMGYICAVS MSFAGMFAFI TGSPYLYMEH
YGISAAVYPF VFGANILVMA SSNRLNIYLL KRRTPQQNLV VGLGIQLCAG VALVALILSG
MDSIYSVAPL MVVFVGMQGL IAPNAMSSML DHFPNMSATA TALQGCLQFS SGAFAGMLVG
AFEIASAWPT VLTMLGASLL GNIGVRVLAG RALGAQEEEG AVTER