| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1317 |
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| Symbol | |
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| ID | 4027771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1500266 |
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| End bp | 1501597 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637966496 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_573371 |
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| Protein GI | 92113443 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.327813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGAAT CCACATCCTC GTTACGCCGC CAGCTGTGGC AGCAGACCTG GCCCATGGCT
ATCGGCGTCC TGGCGCTTCT GGGCTTCCAG CTCGTCGACA GTGCCTTCAT CGCCCGCCTC
GGGACGCAAC CGCTCGCCGC TCAGTCCTTC ACGTTTCCGC TGTCGTTTCT GATCATTGGC
GTGCAGGTGG GGATGGGGAT CGCCATTGCG GCGTTGATTT CGCGAACCCT CGGTGCCGAC
GACATGGCGC GTGCGCGACG CCTGGGTACC CTCGTTCTGT TCGGCGGCAG TGCGCTGATG
GCGGTGCTGA TGCTGATCAT GTGGCTGGCG CAGACGCCGC TGTTCACCTT GCTGGGGGCC
GATACGCCCA CGCGTGCCCT GATCCGTGCC TACTGGGGGC CGCAACTGCT GGCCAACTGG
CTGGGCGCAG TGCTGTATTT CGGCTATAGC CTGTTTCGTG CGCACGGCGA TACCCGCCTG
CCGGGCAAGC TCATGGTCGT CACCAGCCTG CTCAACCTGG GGCTGGATCC ACTGCTGATC
TTCGGTGTCG GCGACTGGTC GGGCTGGGGG CTGCCTGGCG CGGCGTGGGC AACGGCAATC
GCGTTCGCCA TCGGCATCTG GCTGCTGGTA CGGCGTCTTC GTTCGCATGA TTGGCTGGCG
CGTCATGGAC TGCGTCGCGA GGTACGCGAG TCGTCCGGTC CGTTCGTGAC CATCGCGGGC
CCAGCGATGG TCAGCCAGCT GATGCCTCCG CTTTCCGCGA TGCTGGCGAC CTGGGTGGTG
GCCGGGCTGG GCGAAACCGC CGTGGCGGCC TGGGGGCTCG CCAGCCGCCT GGAAACGTTG
TCGCTGATGG TGGTGCTGGC CTTGACCATG TCGCTGCCAC CTTGGCTGGG GCGCTGTTAC
GGGGCGGGAG ACTGGCCACG TATCGAGGCG CTGATGATGC TGGCGGCACG CACCGCTGCC
ATCTGGCAGC TCGGTCTGGG AATCGTCATG GCCGTGGCGG CGCCCTGGGT GGCCGTGGCG
TTGTCGGGCA ATCCGGAAAT ACGCGATGAA CTCGCCATGT TGATTCGCTG GCTGCTGCCC
AGCTACAGCC TGCTGGGGCT GTGCATGCTC GTGGTGTCTG CCTCCAATGC CCTGGGGTGG
CCGATGCGTG CGATGCTGTT GTCGTTCATG CGCCTGTTCG TCTGTTATCT GCCTTGCCTG
GCGCTTGGGG CATGGCTGGC CGGCGTCTTC GGCGTCGCCT GGGGCGCCGC CCTGGGCAAC
GTACTGGCCG GGGGGCTGGC CTGGGGGATT TTCCGCCGCT CCCTGAAGCG TCGCATGGCC
ACCGCGGAGT GA
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| Protein sequence | MTESTSSLRR QLWQQTWPMA IGVLALLGFQ LVDSAFIARL GTQPLAAQSF TFPLSFLIIG
VQVGMGIAIA ALISRTLGAD DMARARRLGT LVLFGGSALM AVLMLIMWLA QTPLFTLLGA
DTPTRALIRA YWGPQLLANW LGAVLYFGYS LFRAHGDTRL PGKLMVVTSL LNLGLDPLLI
FGVGDWSGWG LPGAAWATAI AFAIGIWLLV RRLRSHDWLA RHGLRREVRE SSGPFVTIAG
PAMVSQLMPP LSAMLATWVV AGLGETAVAA WGLASRLETL SLMVVLALTM SLPPWLGRCY
GAGDWPRIEA LMMLAARTAA IWQLGLGIVM AVAAPWVAVA LSGNPEIRDE LAMLIRWLLP
SYSLLGLCML VVSASNALGW PMRAMLLSFM RLFVCYLPCL ALGAWLAGVF GVAWGAALGN
VLAGGLAWGI FRRSLKRRMA TAE
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