Gene Csal_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1294 
Symbol 
ID4027655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1480239 
End bp1481441 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content66% 
IMG OID637966473 
Productmajor facilitator transporter 
Protein accessionYP_573348 
Protein GI92113420 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.556112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAC CGCGCACGCG TGCCTGGTGG CGTGCGACCC TGGCACTGTG CCTGGGCTCT 
TTTACCGTCT TCATCAACCT GTACGTGGCC CAGCCCTTGT TGCCCGCCAT TCGCGAGAGC
TTTGAGGTCT CGACGCTGGC GGCGGGCAGT GCCATGTCGG TGAGCATGCT GACCCTGGCG
TTGTCGTTGC TGTTCTACGG GCCGCTTTCC GATGCCATCG GGCGTGCCGC CATCATGCGC
GTGACGCTGG TGCTGGCCAG CGTGTGCACG CTGGTCATGG CATTTGCGCC CAACTTCGCC
AGTCTGATCG CCCTGCGGGC TCTGCAGGGA TTCTTGCTGG GCGGTTTGCC AGCGGTGGCC
ATTGCCTGGA TGGGGGACGA GTTCGACAAG CCGGCGCTGT TGCTGGCCGT GGGACTGTAC
ATCAGCGGCA ACACGCTCGG CGGCATCGGA GGTCGCGTCA TCGGTGGCGC GGTGGCCGAG
CATTGGAACT GGCATGCGAG CTTCATGGTC ATCGCATGCC TGAGCCTCGT CTGCACCAGC
ATCTTCTGGC GAGCCCTGCC GCCCGCCAGG CAGTTTCGGC CGTCGCCGCT GCGGGTGGGA
AAGGCGGTAC GCGACATGGG CGGGCACTTG CGCGACCCCC GACTGATTGC CGCCTATCTC
ATCGGTGGGT TCAACTTCTT CATCTTCATC AACCAGTACA GCTATGTCAC CTTCCGTCTC
AGCGAGGCCC CGTTTTCGCT GACCTCCCAG TGGTTGGGGC TGATCTTTCT GACCTACCTC
GGCGGCACCC TGGGGTCGGC CCTTTCCGGC CGGGTCGCGC AGCGGCTTTC GCAGCCCGTC
TGCATGATGC TGGGCATCAC GACGCTGATG CTGGGCTCGC TGGTGACGCT GATGCCATCG
TTGATCGCCA TCATCGCCGG GCTGACCGTC AATGCCGTGG GCTTCTTCCT GGCGCATTCC
ATGGCCTCGA GCTGGGTCGG GCGCCACGCC CAACGCGCGC GTGGCAGCGC TTCCTCGCTA
TACCTGGTGT TCTACTATCT GGGGGCGAGC CTCGGTGGGT TGTATCTGGA GCCTTTCTGG
GCGCGCTGGC AGTGGGGCGG CGTGGTCGCC GCCTCCTGGC TGGTGCTGGC GGGAACGCTG
AGCGTCGCGG CCTGGCTGTG GCGCCGCGAA CGCCAGTTGA TCGAGCGCGG CGCCACGGCA
TGA
 
Protein sequence
MIEPRTRAWW RATLALCLGS FTVFINLYVA QPLLPAIRES FEVSTLAAGS AMSVSMLTLA 
LSLLFYGPLS DAIGRAAIMR VTLVLASVCT LVMAFAPNFA SLIALRALQG FLLGGLPAVA
IAWMGDEFDK PALLLAVGLY ISGNTLGGIG GRVIGGAVAE HWNWHASFMV IACLSLVCTS
IFWRALPPAR QFRPSPLRVG KAVRDMGGHL RDPRLIAAYL IGGFNFFIFI NQYSYVTFRL
SEAPFSLTSQ WLGLIFLTYL GGTLGSALSG RVAQRLSQPV CMMLGITTLM LGSLVTLMPS
LIAIIAGLTV NAVGFFLAHS MASSWVGRHA QRARGSASSL YLVFYYLGAS LGGLYLEPFW
ARWQWGGVVA ASWLVLAGTL SVAAWLWRRE RQLIERGATA