Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1294 |
Symbol | |
ID | 4027655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1480239 |
End bp | 1481441 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637966473 |
Product | major facilitator transporter |
Protein accession | YP_573348 |
Protein GI | 92113420 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.556112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAAC CGCGCACGCG TGCCTGGTGG CGTGCGACCC TGGCACTGTG CCTGGGCTCT TTTACCGTCT TCATCAACCT GTACGTGGCC CAGCCCTTGT TGCCCGCCAT TCGCGAGAGC TTTGAGGTCT CGACGCTGGC GGCGGGCAGT GCCATGTCGG TGAGCATGCT GACCCTGGCG TTGTCGTTGC TGTTCTACGG GCCGCTTTCC GATGCCATCG GGCGTGCCGC CATCATGCGC GTGACGCTGG TGCTGGCCAG CGTGTGCACG CTGGTCATGG CATTTGCGCC CAACTTCGCC AGTCTGATCG CCCTGCGGGC TCTGCAGGGA TTCTTGCTGG GCGGTTTGCC AGCGGTGGCC ATTGCCTGGA TGGGGGACGA GTTCGACAAG CCGGCGCTGT TGCTGGCCGT GGGACTGTAC ATCAGCGGCA ACACGCTCGG CGGCATCGGA GGTCGCGTCA TCGGTGGCGC GGTGGCCGAG CATTGGAACT GGCATGCGAG CTTCATGGTC ATCGCATGCC TGAGCCTCGT CTGCACCAGC ATCTTCTGGC GAGCCCTGCC GCCCGCCAGG CAGTTTCGGC CGTCGCCGCT GCGGGTGGGA AAGGCGGTAC GCGACATGGG CGGGCACTTG CGCGACCCCC GACTGATTGC CGCCTATCTC ATCGGTGGGT TCAACTTCTT CATCTTCATC AACCAGTACA GCTATGTCAC CTTCCGTCTC AGCGAGGCCC CGTTTTCGCT GACCTCCCAG TGGTTGGGGC TGATCTTTCT GACCTACCTC GGCGGCACCC TGGGGTCGGC CCTTTCCGGC CGGGTCGCGC AGCGGCTTTC GCAGCCCGTC TGCATGATGC TGGGCATCAC GACGCTGATG CTGGGCTCGC TGGTGACGCT GATGCCATCG TTGATCGCCA TCATCGCCGG GCTGACCGTC AATGCCGTGG GCTTCTTCCT GGCGCATTCC ATGGCCTCGA GCTGGGTCGG GCGCCACGCC CAACGCGCGC GTGGCAGCGC TTCCTCGCTA TACCTGGTGT TCTACTATCT GGGGGCGAGC CTCGGTGGGT TGTATCTGGA GCCTTTCTGG GCGCGCTGGC AGTGGGGCGG CGTGGTCGCC GCCTCCTGGC TGGTGCTGGC GGGAACGCTG AGCGTCGCGG CCTGGCTGTG GCGCCGCGAA CGCCAGTTGA TCGAGCGCGG CGCCACGGCA TGA
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Protein sequence | MIEPRTRAWW RATLALCLGS FTVFINLYVA QPLLPAIRES FEVSTLAAGS AMSVSMLTLA LSLLFYGPLS DAIGRAAIMR VTLVLASVCT LVMAFAPNFA SLIALRALQG FLLGGLPAVA IAWMGDEFDK PALLLAVGLY ISGNTLGGIG GRVIGGAVAE HWNWHASFMV IACLSLVCTS IFWRALPPAR QFRPSPLRVG KAVRDMGGHL RDPRLIAAYL IGGFNFFIFI NQYSYVTFRL SEAPFSLTSQ WLGLIFLTYL GGTLGSALSG RVAQRLSQPV CMMLGITTLM LGSLVTLMPS LIAIIAGLTV NAVGFFLAHS MASSWVGRHA QRARGSASSL YLVFYYLGAS LGGLYLEPFW ARWQWGGVVA ASWLVLAGTL SVAAWLWRRE RQLIERGATA
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