| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1289 |
|---|
| Symbol | |
|---|
| ID | 4027650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 1473824 |
|---|
| End bp | 1475104 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637966468 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_573343 |
|---|
| Protein GI | 92113415 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG CACAGCTCAA CGAACTCAAG CAGCGCTATG TCGCCAGCGG CGCCGCGAGC
CCGGCCGGCC AGTTTGCCGA GCGCGCGGAA AACGCCCTGA TCTGGGACGC CGACGGCAAT
CGCATCATCG ATTTCGCCGG CGGCATCGGT GTGCTCAACA TCGGTCACCG TCACCCCAAG
GTGGTTCAGG CGGTCAAGGA CCAGCTCGAC CGCGTGATGC ATACCTGCCA GACGGTGATG
CCCTACGAGG GCTACGTGAA GGTGGCCGAA AAGCTCAGCC AGCTCACGCC GGTGCGCGGT
CACGGCAAGG TGATGCTGGC CAACTCCGGC GCCGAGGCGC TGGAAAACGC GGTCAAGGTC
GCCCGTGCGG CCACCGGACG CGACAACGTC ATCTGCTTCA CCGGCGGCTA CCACGGCCGG
ACGTTCATGA CCATGGCCAT GAACGGCAAG GTCGCCCCCT ATGCCACCGA TTTCGGCAGC
ATGCCGGGCA ATGTCTTCCG CGCCCCTTAT CCGGTGCCCT ACCACGGCGT CAGCGAGGAA
GATGCGTTGC GCGGCCTGAG AATGACGCTC AAGACCGATG CCAATCCGCA CAACACTGCT
GCCGTGGTGC TCGAGCCGGT GCTCGGTGAA GGCGGCTTCT ATGCGGCCTC GCCTAGCTTC
CTCAAGGCGG TCCGCGAGAT CTGCGACGAG CACGGCATGC TGATGATCGT CGACGAGGTG
CAATCCGGTT TCGGGCGCAC CGGCAAGCTG TTTGCCATCG AGCACAGCGG CGTCGAGCCG
GACATCATCA CCATGGCCAA GAGCATGGCC GACGGCATGC CGATCTCCGC CGTGGTCGGT
ACCGACAAGG TCATGGATGC CTCCGGCGGC AACTCCCTCG GCGGCACCTA CACCGGTAGC
CCGGTGTCCT GCGCAGCCAC CCTGGCGGTG CTGGAAGTCT TCGAAGAAGA GAAGATTCTC
GAGAAGAGCC AGGCGCTGGG CGACAAGCTG GCCGAGCGCT TCGCCAAGTG GCAGCAGGAC
TTCGCCTGCG TCGACAACGG ACGCAACCTG GGCGCCATGG CCGCCTTCGA CGTGGTGTCC
GACAAGGCCA ACCACACGCC GGACGCGGAC CTGGCCGGCG CGCTGTGCAA GAAGGCGCGT
GAAAAGGGCC TGATCCTGCT GTCCTGCGGG CTCTACGGCA ATACCATCCG CTTCTTGATG
CCGGTGACCA TCGAGGACGA GGTGCTTCAG GAAGGTCTGG GCATCGTCGA AGACTGCCTC
AAGGAACTGA CTCAGGCATA A
|
|---|
| Protein sequence | MNNAQLNELK QRYVASGAAS PAGQFAERAE NALIWDADGN RIIDFAGGIG VLNIGHRHPK
VVQAVKDQLD RVMHTCQTVM PYEGYVKVAE KLSQLTPVRG HGKVMLANSG AEALENAVKV
ARAATGRDNV ICFTGGYHGR TFMTMAMNGK VAPYATDFGS MPGNVFRAPY PVPYHGVSEE
DALRGLRMTL KTDANPHNTA AVVLEPVLGE GGFYAASPSF LKAVREICDE HGMLMIVDEV
QSGFGRTGKL FAIEHSGVEP DIITMAKSMA DGMPISAVVG TDKVMDASGG NSLGGTYTGS
PVSCAATLAV LEVFEEEKIL EKSQALGDKL AERFAKWQQD FACVDNGRNL GAMAAFDVVS
DKANHTPDAD LAGALCKKAR EKGLILLSCG LYGNTIRFLM PVTIEDEVLQ EGLGIVEDCL
KELTQA
|
|---|
| |