Gene Csal_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1238 
Symbol 
ID4027616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp1417130 
End bp1417843 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID637966416 
Producthypothetical protein 
Protein accessionYP_573292 
Protein GI92113364 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.56645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGAG AAAAGAGCCG CCGTGGACTG AAACGGTGGG GGCGGCGACT GTTCAAGTGG 
TGTCTTGTCG GCGTGGTGTC CGTGCTTGCG GTGGTCGTGG CGCTCAACCT CTGGGTGTTC 
GCCAAGACCG CCGGGCGCAT TCAGCATGAC ACGCTGCTCT GCGCCACCGA ACCGGTCGGC 
CTGGTCTTCG GTACCGCCGA AGGCCTGCGC GGCGGAGGCC ACAACCCCTA TTTCACCGCA 
CGCATGGAAG CGGCGGCGCA ATTGCTGCGG CTCGGCCACG TGCGCCATCT CCTGCTTTCC 
GGCGACAATC GCACCCGTTA CTACAATGAG CCGATCGCCA TGTGGCGGGC TCTGCGGGCA 
CGCAACGTCG CCAGCGACGA CATGACCCTG GATTATGCCG GTTTCAGTAC CTTCGACAGT 
GTGGTGCGTG CGCGTCGCAT CTTCGGTGTC GAGCACGTGT TGCTGGTTTC TCAGGCCTGG 
CACCTGCCGC GGGCGCTGTT CATCGCCGAT GCGGCGGGGC TGAAGGCGCA GGGCTGTGCG 
GTTCCCGGGG GGAAAGTCAG CGGCGAGTGG CAGCTCTGGC TGCGCGAGTG GCTGGCGCGA 
GCGGCTGCCG TCGGCGATCT CTATCTGTGG GGGCGCGATC CCTATTTTCT GGGGCCCCCG 
GAGACACTGC CGATTTTCGA GCCGCTCAAG GGCAAGGCGG CCGGGGAGGA GTAA
 
Protein sequence
MPREKSRRGL KRWGRRLFKW CLVGVVSVLA VVVALNLWVF AKTAGRIQHD TLLCATEPVG 
LVFGTAEGLR GGGHNPYFTA RMEAAAQLLR LGHVRHLLLS GDNRTRYYNE PIAMWRALRA 
RNVASDDMTL DYAGFSTFDS VVRARRIFGV EHVLLVSQAW HLPRALFIAD AAGLKAQGCA 
VPGGKVSGEW QLWLREWLAR AAAVGDLYLW GRDPYFLGPP ETLPIFEPLK GKAAGEE