| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1106 |
|---|
| Symbol | |
|---|
| ID | 4029044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1255878 |
|---|
| End bp | 1257647 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637966283 |
|---|
| Product | TrkA-like protein |
|---|
| Protein accession | YP_573161 |
|---|
| Protein GI | 92113233 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTCG ATGCGTGGCT GACGCTGGCC GTGGTGGCGG CGTCGTTCCT GTTGATGGCG
CTGAGCCGTC TCGGGCCGGA CGTGATTCTC CTGGGCGCGG TCATCGCGCT GTTCGGCGTC
GGCATCATCG ATGCCGACGA GGCCCTGGGA GGCTTTTCCA ACAGCGGCCT GTTCACCGTC
GCCTTCATGT ACATCCTCGT GGCAAGCATA CGCGAGACGG GCGGCATCGA CCTGATCATT
CGCTACCTGC TGGGCCGGCC GCGACACGAG CTGGGCGCCC AGGGGCGCCT GCTGTTGCCG
GTCTCGGCGA TCAGCGCCTT TCTCAACAAC ACGCCGGTGG TGGCGACCTT CCTGCCGGCG
GTACTGAGCT GGAGTCGCCG CCTGCGTCTG CCCGCGCACC GCCTGCTGAT GCCGCTGAGC
TTCGCCTCGA TCCTGGGCGG CACCTGCTCG CTGATGGGCA CCAGCACCAA CCTGGTGGTC
GATGGCCTGC TGCGTGAACG CTATCCCGAG CGTGCCCTGC ACCTGTTCGA CATCGCCTGG
GTCGGCGTGC CCGTGGCGCT GGTCGGGCTG GCCTACCTGA TGCTGGTGGG GCGCTGGCTG
CTGCCCCGGC GCCGCACCGC ATCGGATGTC TTCGAGAACC CGCGCGAGTA CACCATCGAG
ATGCAGGTCG ACCCGCAAGG CCCCATTGTC GACAAGAGCG TCGAGGAAGC CGGGCTGCGC
CATCTCGAGG GCCTGTTTCT GGTCGAGATC GAACGCGATG GCAACGTGGT CTCGGTCGTG
GGGCGCGGCG AGCGCCTCAA GGCCAATGAT CGCCTGGTCT TCGCTGGGAC CACGGAAGCG
GCGGTGGAGT TGCAGCAGAT TCGTGGCTTG CGGCCCACCG GTCAGGGGCA GTCGAGCCTC
AAGAAGGCGT TCGCCGAGCG GCGTCTGGTC GAAGCGGTGG TCTCCGAGCA ATGCCAGTTC
CTGGGTCGGC GCCTGCGCGA AGGGCATTTC CGAACCTTCT ATGGCGCCTC GGTGCTGGCG
GTATGCCGGC ATGGCGAGCG CGTATCCGGC AATCTGGGAC AGATCCGCCT GCAGGCGGCG
GACGTGCTGC TCATGGAGGT ACGCCCGGCG TTCGTCGAGC GACATCGTCA GTCGCGCGAC
TTCCTGCTGA TCAGCGAGCT CAATGGCCAG GCGCGGCCGC ACCACGAACG CGCCTGGGTG
GCATGGAGCA TCATGCTCGG CGTGGTCGGG CTGGCGGCGT TCGGGGTCCT GAGCCTGCTC
AAGGCGGCGA TGCTCGGCGT CGCACTGGCG CTGATGACGG GGTGCTGCTC CATCGGCGCG
GCCCGTCGTG GACTGGACAC CCAGGTGCTG CTGACCATCG CCGCGTCCTT CGGGCTGGGA
GCGGCGATGG AAAGCTCCGG TGCCGCCCAG GTCCTCGCCC AGGGCGCCCT GTCGCTGGCC
GATGGCAACC CGTACCTGCT GTTGATCGGA GCGTATCTGG TGGTGGCGTT GCTCACCGAA
GTGGTCACCA ACAACGCGGC GGCGGTGATC GCCTTTCCCA TCGTCACCGG AGCCGCGCAG
CAATTGGGCG TGGATATCAT GCCCTTCGTG ATCGCGGTGA TGTTCGCCGC CTCGGCCAGC
TTCCTGACGC CGATCGGCTA TCAGACCAAC CTGATGGTCT ACGGGCCCGG CGGGTATCGC
TTCAGCGACT ATCTGCGCGT CGGGGGCGGC CTGAGTGTAT TGGTGGGCGC GGTGACGCTG
GTGCTGATTC CGTTGATCTG GCCGTTCTGA
|
|---|
| Protein sequence | MPFDAWLTLA VVAASFLLMA LSRLGPDVIL LGAVIALFGV GIIDADEALG GFSNSGLFTV
AFMYILVASI RETGGIDLII RYLLGRPRHE LGAQGRLLLP VSAISAFLNN TPVVATFLPA
VLSWSRRLRL PAHRLLMPLS FASILGGTCS LMGTSTNLVV DGLLRERYPE RALHLFDIAW
VGVPVALVGL AYLMLVGRWL LPRRRTASDV FENPREYTIE MQVDPQGPIV DKSVEEAGLR
HLEGLFLVEI ERDGNVVSVV GRGERLKAND RLVFAGTTEA AVELQQIRGL RPTGQGQSSL
KKAFAERRLV EAVVSEQCQF LGRRLREGHF RTFYGASVLA VCRHGERVSG NLGQIRLQAA
DVLLMEVRPA FVERHRQSRD FLLISELNGQ ARPHHERAWV AWSIMLGVVG LAAFGVLSLL
KAAMLGVALA LMTGCCSIGA ARRGLDTQVL LTIAASFGLG AAMESSGAAQ VLAQGALSLA
DGNPYLLLIG AYLVVALLTE VVTNNAAAVI AFPIVTGAAQ QLGVDIMPFV IAVMFAASAS
FLTPIGYQTN LMVYGPGGYR FSDYLRVGGG LSVLVGAVTL VLIPLIWPF
|
|---|
| |