Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1013 |
Symbol | |
ID | 4027859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 1142452 |
End bp | 1143636 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637966190 |
Product | secretion protein HlyD |
Protein accession | YP_573069 |
Protein GI | 92113141 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCACG ACACCAGCAT GACCGACGAC GCCTCAACGC CTCCAACATC CCACCGACGT CTGCCACGCG GTGCCAAATG GCTACTTCTC GCCATCATCG TCGTGCTCTT TCTGGTGTGG CTGGGCTTCG CCATCGCCCA CCGCATGACC CACGTCAGCG CTCAGGACGC CCGCGTCATG GCCGATCAGA TCACCGTGAG CAGCCGCCTG GACGGTCGGA TTACCCACTT CACGCTGACC GAAGGCGACA TGCTCGTCGA AAACGATGAG ATTGCCACGC TCTACAGCGC ACCCGATGAA CGCCGCCTGG CCTCCCTCGA GGCAGACGTC GTCGCCCAGC GTGCGCGACT CGACTACGAG AAGACACGGC TGGCGATGGC CGAAAAGCAG CTCGAGGGCG GTATGAATCT GACCCGACAG GAGCTCGACG CCAGCAAGGC CGCCGAGAAA GCCGCACAGG CACGACTCAC TGAAGCCGAA CGTGACTTCA AGCGCGCCGA TGCTCTGTAC AAGAAACACT CGGTTTCCGA GCAGCGGCGC GATCAGGACT ACTATGCCTA TCAAGCCGCA CTCGCCGAGC ATGCCCAGGC GCAGCAGGAA GTGCAGGTCA ATCAGGCGCT GGCCGACAAC GCCCGAGTCG GTTTCATCAA CGGCTCGCAG ATGCCATTGC CCAACCCCGA TGTGCTGCGC CAGCAAGTCA AGATCGCCGA ACGCGACCTG GCGTCGGCCG CAGCCAAGCG CGACGAGGAG CGTCTACGCC TCGACGACCT GCATATCACC AGTCCCAGCG ACGGTGTGAT CAACAAGACG CTGGTCGATC AGGGCGAGTA TGTCAGTGCC GGACAACCGA TCCTGATGAT GCACGACCCC GACAAGCTGT GGGTCGAAGC CAACATCAAG GAAACCGACA TCGGCGAATT GCGTCAGGGC CAGCCGGTGG CGATCACCGT CGATGCCTTC CCCGACGCCA TCTTCAAGGG GCATGTCAGC GTCATCGGGC GCGCCGCCAC CAGCCAGTTC GCACTGCTGC CGGATCCCAA CCCCTCCGGC AATTTCACCA AGATCACCCA GCGCCTGCCG GTTCGCATTC GGTTCGACGA CGGACCGACC GAGCTGATCG GCCCAGGCAT GATGGTCGAG GTGGACATCG ACGTCAGCGA CACCGAACCA CGCGATCATG GCTGA
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Protein sequence | MTHDTSMTDD ASTPPTSHRR LPRGAKWLLL AIIVVLFLVW LGFAIAHRMT HVSAQDARVM ADQITVSSRL DGRITHFTLT EGDMLVENDE IATLYSAPDE RRLASLEADV VAQRARLDYE KTRLAMAEKQ LEGGMNLTRQ ELDASKAAEK AAQARLTEAE RDFKRADALY KKHSVSEQRR DQDYYAYQAA LAEHAQAQQE VQVNQALADN ARVGFINGSQ MPLPNPDVLR QQVKIAERDL ASAAAKRDEE RLRLDDLHIT SPSDGVINKT LVDQGEYVSA GQPILMMHDP DKLWVEANIK ETDIGELRQG QPVAITVDAF PDAIFKGHVS VIGRAATSQF ALLPDPNPSG NFTKITQRLP VRIRFDDGPT ELIGPGMMVE VDIDVSDTEP RDHG
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