Gene Csal_0492 details

Gene Information

• Locus tag: Csal_0492
• ID: 4026862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 540019
• End bp: 540645
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637965651
• Product: Tfp pilus assembly protein PilX-like protein
• Protein accession: YP_572553
• Protein GI: 92112625
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4726] Tfp pilus assembly protein PilX

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACCG TCGTGCCGCT GTCGCAGCGC GGGATGACGC TGGTCATCGC GCTCGTCCTG 
CTGATGGCGA TGACGGCGCT GGCCGTTTCC GGGCTGCAAG GGGCGGTATT GCAGGAGCGC 
ATGGCGCGTA ATCTCATGGA CCGCCAAGTG GCGTTCCAGG CCGCGGAGGC CGCACTCGAG 
GAAGGCGAGT GGCGGTTGCG CCATGCGGCC GTCACGCTGC CCGACGCGGC GGGAGAATGC 
ACGGCACGTG ACTGCCTGGC CGAGCGTACG CAACGTGCCG TGCAGTGGTC GGCCGAGCGC 
TGGCGACGCG ATGGGCTGGC ATATGGCGAT AGCGGTGCCC CGCTACCGGC GGGGGTCAGC 
GAGCCGCCGC GAGTCACGCT CGCCGTGCTG GAAAGCCGGT GCCCCGAGTC GGGGCCTTCG 
TGTCGGGTGG TATTCGGCGT GACGGCCTTC GCGTGGGGGC AACGCGCGGT GACGCATGCG 
GTGCTCACGC GGCGCGTGAC GCTGGATGTC GCGCGCAAGA CGGCCCAGGC ACTGGCTCAA 
GCTGATGCGC AGGATGCCGA TAACGACGCT ACGCAGGTGG TCCGTCCGGC GGCGTCGCGG 
GCCGCGTGGC GTGCGATCAT GCGTTGA 

 

Protein sequence

MSTVVPLSQR GMTLVIALVL LMAMTALAVS GLQGAVLQER MARNLMDRQV AFQAAEAALE 
EGEWRLRHAA VTLPDAAGEC TARDCLAERT QRAVQWSAER WRRDGLAYGD SGAPLPAGVS 
EPPRVTLAVL ESRCPESGPS CRVVFGVTAF AWGQRAVTHA VLTRRVTLDV ARKTAQALAQ 
ADAQDADNDA TQVVRPAASR AAWRAIMR