Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0393 |
Symbol | |
ID | 4025987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 438966 |
End bp | 439895 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637965542 |
Product | auxin efflux carrier |
Protein accession | YP_572454 |
Protein GI | 92112526 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.193838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCACG TCGACCTTTC CCAACCGCTG TGGATGCTGC TGATCTTCGT GGCACTGGGC TGGCTCTGCA CGCGCCGGCT GGCCATCGAC CCGCGCCCCA TCGCCACGCT GCTGATCTAT CTCATCGCAC CGCTGACCTT CTTTCGCGGG CTTTATCTGG GCGAGCCTTC GCCGGCCTTG CTCGGTCTGA CGGCCGGCAT GTTCGTGCTG GCCAGTCTGC TGTGCCTGGT GACTCATGCC GTGGCGCGGC GTGGGTTCGC TCCGCAGGAG GCCGCCCTGC TGGCGTTCTC CGCGGGTACC GGCAACACCG GTTATTTCGG GCTGCCGCTG GCCATGGTGC TGCTGCCGCC CGAGGGCGTC GCCGCCTATC TGTTCTGCCT GCTCGGCATC ACGCTCTTCG AGTTCACCGT GGGCTTCTAC ATCAGCGCAC GGGGCCGATT CTCGGTACGC CAGAGCCTTG GCAAGATCGT GCGTCTGCCA CTGGTCTACG CCTTTCTGGC AGCACTCGGC GCCCATCACC TGCCATGGTC GGTGCCTGGT GCAGTGATCG AAGGGCTCGA CTACTTTCGT GCCAGCTATA CCGTGCTCGG CATGATGATC ATCGGCATGA CCCTCGGCGG TGTCTCGCTG CGCGAGTTCG ATGCCCGCTT TCTCGCCGCC AGCATCGCCG CGCGCTACGT GATGTGGCCG CTGGTGATGC TCGGCCTGGT GCTCGGCCTG CAGGCGACGA CAGGGCTCTC GACGACGATG ACCGGCGTGC TGCTGTTGCT GGGGGTGGTG CCCATGGCGG CCAATGTCGT GGTGATCGCC ATGGAGCTCG ACATGCGGCC CGCCAAGGGC GCGATCGCCG TTCTCGTGAC GACCGTGGCC GCGCCGCTGG TGATTCCGCC CTACCTCGAC ATGCTGTGGC GACTCGCGGG CCTCGACTAG
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Protein sequence | MSHVDLSQPL WMLLIFVALG WLCTRRLAID PRPIATLLIY LIAPLTFFRG LYLGEPSPAL LGLTAGMFVL ASLLCLVTHA VARRGFAPQE AALLAFSAGT GNTGYFGLPL AMVLLPPEGV AAYLFCLLGI TLFEFTVGFY ISARGRFSVR QSLGKIVRLP LVYAFLAALG AHHLPWSVPG AVIEGLDYFR ASYTVLGMMI IGMTLGGVSL REFDARFLAA SIAARYVMWP LVMLGLVLGL QATTGLSTTM TGVLLLLGVV PMAANVVVIA MELDMRPAKG AIAVLVTTVA APLVIPPYLD MLWRLAGLD
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