Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0361 |
Symbol | |
ID | 4026029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 403944 |
End bp | 405491 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637965510 |
Product | ABC transporter related |
Protein accession | YP_572422 |
Protein GI | 92112494 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGAAC GAGCCGCATC TCAGGACGAA CGCGTCGGAA GGGTAATCCT GTCGGCACGC AATGTTGCCA AGTCCTTCGG TAATGTTCAG GCGCTGAAGC ACGTCGATTT CGACATCCAC TACGGGCAGG TCACCACGCT CTTCGGCGAA AACGGAGCGG GCAAGTCGAC CCTGATGAAA ATCCTCTCGG GGGTCATCAG GCCGTCGTCC GGAGACATTC TGCTCGAGGG CGAGCCGGTC AGCTTCTCCT CGACCACGGA CGCGCAGCGC CTGGGGGTGT CGATCATTCA CCAGGAGCTG AGCCTGGCAC CCAACCTGAG CGTTCGCGAC AACATCTTCA TGGGGCGCGA GCTGCGCGGT GCCACGGGGA TCGATTATGC GGAGGAGGAG CGTCAGGCGC GACGCTTGAT GGAGGAACTG GACGAACCCA TCGATCCGCT GACGCTGGTG GAGGATCTGC GCCTCGGGCA GCAGCAGATC GTCGAAATCG CCCGCGCGCT GTCCGTGAAT TCACGCATTC TGATCATGGA CGAACCGACC TCGGCATTGA GCGCCTCCGA GGTCGAGGTG CTGTTTCGGG TCATCCGCGA TCTCAAGAGC CGGGGCGTCT CCATCGTCTA CATTTCCCAC CATCTCGAAG AAGCGCTGCT CATTACCGAT CACGCCGTGG TGTTGCGCGA TGGGGCGATG ACGGCCTATG CCCGCCGCGA GGACATCGAC CTGGAATGGA TCGTGCGCAA CATGGTGGGT GAAAACTTCG ATCTGGGCTC GCCGCCGGGC GGTTATGCCA TGGGCGAGGT CATGCTTTCC CTCGAGGGCG TGTCGGTGCC CGACGCCACC GTGCCCGGAC GCCACGTGGT CGACGACCTG TCGCTGGCGG TGCGCGCCGG GGAGATCGTG TGCATTTACG GGCTGATGGG GGCGGGACGC ACGGAACTGC TGGAAAGCGT CGCCGGGCGT GGCGAGATGA GCGCGGGGCG TGTGTGTCTG CACGGCGAGG ACATTTCGCG GCTGAGTATC GCGGAGCGCA TCGCCAAGGG ACTGGTGCTG GTACCCGAGG ATCGGCAGCG CGATGGTCTG GTGCAGACGA TGTCGGTGGG CGAGAACCTG TCGCTCGCCA GCATCGGGGC CTTTACCAAG GGGTTGGTGA CGTCGCGTCG TCGCGAACGC CATGTCGTCG AGGCCTCGAT CGAGAACGTG CATATCAAGG CCGATGGTGC GGAAGCGGCC ATCGGCTCCT TGTCCGGCGG GAACCAGCAG AAGGTCGTGA TCGGCAAGAT GCTGGCGACC CGGCCCCAGG TGGTGCTGCT CGACGAGCCG AGCCGGGGGA TCGACATCGG TGCCAAGGCC GAAGTGTTCA AGTTGCTCAG CGAGGGCGCC GCTCGGGAAG GGCTGGCCGT GGTGTTTTCG ACCTCGGAGG TCGGTGAATG CCTGAGCATT GCACACCGCA TCGTGGTGAT GAGCCGCGGT CGCATCGCGG CGGAGTTCGG TGCCGATGCC AGCAAGGAAG ACATCATGGC GGCCTCGGGC GAAGCCGTGG TCGCTTGA
|
Protein sequence | MNERAASQDE RVGRVILSAR NVAKSFGNVQ ALKHVDFDIH YGQVTTLFGE NGAGKSTLMK ILSGVIRPSS GDILLEGEPV SFSSTTDAQR LGVSIIHQEL SLAPNLSVRD NIFMGRELRG ATGIDYAEEE RQARRLMEEL DEPIDPLTLV EDLRLGQQQI VEIARALSVN SRILIMDEPT SALSASEVEV LFRVIRDLKS RGVSIVYISH HLEEALLITD HAVVLRDGAM TAYARREDID LEWIVRNMVG ENFDLGSPPG GYAMGEVMLS LEGVSVPDAT VPGRHVVDDL SLAVRAGEIV CIYGLMGAGR TELLESVAGR GEMSAGRVCL HGEDISRLSI AERIAKGLVL VPEDRQRDGL VQTMSVGENL SLASIGAFTK GLVTSRRRER HVVEASIENV HIKADGAEAA IGSLSGGNQQ KVVIGKMLAT RPQVVLLDEP SRGIDIGAKA EVFKLLSEGA AREGLAVVFS TSEVGECLSI AHRIVVMSRG RIAAEFGADA SKEDIMAASG EAVVA
|
| |