Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0293 |
Symbol | |
ID | 4027063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 332550 |
End bp | 333416 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637965443 |
Product | shikimate dehydrogenase |
Protein accession | YP_572355 |
Protein GI | 92112427 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTTG GGTTGATCGG CAAGGGCATC ATGAATTCCA GTTCGCCCGA CCTGCACGTG CGGCTGGGCA AGCTGACCGG CATTCCCGCT AGCTACGATC TTTTCGACAC GCTGGTGACG CAGATCGACT CGCTGGAGAG CCAGGTTCGC GAGGTCATGG CGACCGGTTA TCGCGGCGTC AACGTCACCT ATCCTTACAA GGAGGAGGCG GTGCGTCTGG CAACGCGCGT TGGCGAGGGC GCGCGCTTGG TCGGCGCTGC CAACACCCTG GTCTTCCAAG ACGACGAGAT CCAGGCCGAG AACACTGATT TCACCGGCTT CATCAGTGGT TATCGGGCCA CCGTCGGTGA TCGTCCTCCC GGTCGTGTGT TACTGATAGG CACTGGCGGC GTGGGCAAGG CGGTCGCCTT CGGTCTGGCC AAGCTGGGCG CCGATGAGGT ATTGCTGATG GACCTCGACC TTGAAAAGGC CGAACGTCTC GCCCGAGAAC TCGACCACGC CGGCTTCTCG GCTGCAGCGG TTGCACCCGA GGCACTGGAG GCGACCGCCG CGCGCTGTGA TGGGGTGGTC AACTGCACGC CGATCGGCCA TGAGAAGAGC CCGGGTTACC CACTGCCTCC AGCGCTCATT CGCGCCGACC AGTGGATCTT CGATGCCGTC TACGTGCCGG CGGTCACCGA GTTCATCGCC GCCGCCCGGG CGGCAGGGGC CCAAGTCGTC AGCGGTGTCA GTCTGTTCGT CTTCCAGGGC GTGGATGCCT TCAAGTTCTT CTGCGAGGAT GCCGACAAGC GGTCGCTGGC CGACGCTCAG GCCGCGACCC TGTTCGATCA TTACAAGCAG ACCTTGCTGC AGGAGAAGAA TGCATGA
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Protein sequence | MRLGLIGKGI MNSSSPDLHV RLGKLTGIPA SYDLFDTLVT QIDSLESQVR EVMATGYRGV NVTYPYKEEA VRLATRVGEG ARLVGAANTL VFQDDEIQAE NTDFTGFISG YRATVGDRPP GRVLLIGTGG VGKAVAFGLA KLGADEVLLM DLDLEKAERL ARELDHAGFS AAAVAPEALE ATAARCDGVV NCTPIGHEKS PGYPLPPALI RADQWIFDAV YVPAVTEFIA AARAAGAQVV SGVSLFVFQG VDAFKFFCED ADKRSLADAQ AATLFDHYKQ TLLQEKNA
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