| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0226 |
|---|
| Symbol | |
|---|
| ID | 4027309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 256873 |
|---|
| End bp | 258120 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637965377 |
|---|
| Product | HipA-like protein |
|---|
| Protein accession | YP_572289 |
|---|
| Protein GI | 92112361 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGT TCGAAGTACA TATCGACCTC GGTGGGAGCA CCTTTCCAGT CGGTCTGGCC
AGGTGCAATC GCGTGCGTGG CACGGAGAGG ATTCTTTTCG AATACGACGC CGAATGGCTC
GCGTCGCCGG ATCGCTTCTC ACTGGAGCCT GCCCTTGCAC TCACGCGGGG AGCCTTCGCT
CCACCTGCAG GGATGACCAG CTTCGGCTCG ATTGGCGACT CGGCGCCCGA CACCTGGGGC
CGTCGTCTGA TGCAACGTGC CGAGCGGCGG CGTGCCGCGC GGGAGGGTCG CAGTGTTCGA
ACGCTTGCCG AGAGCGATTA CCTGCTGGGA GTGTCTGATG AGACTCGGCT TGGTGCCCTG
CGTTTTCGCC GAGTGGGCGA GACGTCATTT CAGGCGCCGA TTCAGGCTGG CGTTCCTGCC
CTCGTCGAGC TGGGTCGACT GCTTCAGGTC ACAGAGCGTG TCTTGCGTGA CGAGGAAACG
GATGAAGACC TCCAGCTCAT CTTTGCCCCG GGCTCGTCCC TGGGTGGGGC CCGCCCGAAA
GCCTCGGTCA TCGATCAGTA CGGCCACCTC GCGATCGCCA AGTTCCCGAA GGATACCGAC
GAGTACAGTG TGGAGACCTG GGAAGAAATC GCGCTCCGCT TGGCCAACCA GGCTGGCATC
GTGACGCCGC AGCACGAACT GGTCGACGTG GGCGGTCGGG CCGTCATGCT GTCGAGACGA
TTCGATCGAG ATGGCACTAT CCGCATTCCG TTTCTTTCCG CGATGGCAAT GATGGGCGCC
AGGGATGGCG AACCTGGCAG CTATCCCGAA ATGGTCGATG CTCTGACCGC GCATGGCGCT
CAAGGAAAGA CCGACGCGCA CGCACTGTAT CGGCGCGTCG TCTTCAGCGT GATGATCTCC
AATGTCGACG ATCATCTGCG CAATCACGGC TTTCTGTGGT TGGGGAACGC TGGATGGTCA
CTCGCTCCGG CCTATGACCT CAACCCGGTG CCCAGTGACC TCAAGGCGCG GGTGTTAACC
ACGAACATCG ATCTCGACGA GAGCACCTGC TCGGTCGATC TGCTGGAGGC GGCATCCGGT
TATTTTGGGC TCACGCTGGC CAACGCCCGG CGAATCATCA AGGACGTTGC GTCAGTAACC
GCAACCTGGC GGAACACTGC CAGGGCCGTT GGCGCACGTC CGGCCGAGAT CGAGCGTATG
GCCAGCGCCT TCGAGCATGA TGACTTACAG CATGGGCTGG CGTTGTAA
|
|---|
| Protein sequence | MTEFEVHIDL GGSTFPVGLA RCNRVRGTER ILFEYDAEWL ASPDRFSLEP ALALTRGAFA
PPAGMTSFGS IGDSAPDTWG RRLMQRAERR RAAREGRSVR TLAESDYLLG VSDETRLGAL
RFRRVGETSF QAPIQAGVPA LVELGRLLQV TERVLRDEET DEDLQLIFAP GSSLGGARPK
ASVIDQYGHL AIAKFPKDTD EYSVETWEEI ALRLANQAGI VTPQHELVDV GGRAVMLSRR
FDRDGTIRIP FLSAMAMMGA RDGEPGSYPE MVDALTAHGA QGKTDAHALY RRVVFSVMIS
NVDDHLRNHG FLWLGNAGWS LAPAYDLNPV PSDLKARVLT TNIDLDESTC SVDLLEAASG
YFGLTLANAR RIIKDVASVT ATWRNTARAV GARPAEIERM ASAFEHDDLQ HGLAL
|
|---|
| |