Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0193 |
Symbol | ampC |
ID | 4026759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 215209 |
End bp | 216372 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637965344 |
Product | beta-lactamase |
Protein accession | YP_572256 |
Protein GI | 92112328 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGAT GGCTGCTGGG TGTATCGCTG ACGTTACTGG GGGCCAGTGG CGTGGCGCAG GCGCAGGCGC AGGACGAGGC ATCGAACAAG CAGGTGCTCG ACCCCATCGT CGCGTCGTTG ATGGAAGCGC AGCAGATCCC CGGCATGGCG GTCGCCCTCA TCGGGCCGAA GGGGACGACG ATCGCCGATT ACGGCGTCGC CGACCGCAAG ACCGGCACGC CGGTCGATGA TGACACCCTG TTCGAGATCG GCTCGCTCAG CAAGACCTTG ACCGCGACCC TGGCCTCGTT GGCCGCCGTC GAGGGCGAGC TCGACCTCGA GGCGCCCGTG AGCCGTTACC TGCCTGAGCT CGAAGGCAGC GCCTTCGACA GGATCGATGG GCTCAATCTT GGTACTCACA CCGGCGGCGG GCTGCCGCTG TTCGTGCCTG ACGAAGTGAC CGACCGTGCA TCGCTGATGG CCTGGTATCG AGACTGGCAG CCAAGCGAGC CCATCGGCGA GAGCCGTACC TATTCCAATC TGGGGATCGG CCTGTTGGGT CTGGAGGCGG CGGCGAGCCT GGGGGGCGAA TTCGTGCCGA CGATGCGCAC CAAGGTGCTG GCGCCGCTCG GCATGCGGGA CACCTGGTAC GACGTTCCCG AGGCGCGCAT GGCACACTAC GCCATGGGCG AGACCAAGGA CGGCCAGCCG ATTCATGTCT CGTCCGGCGT GCTCGACGAC GAAGCCTACG GGCTCAAGAC CACGGCCGCC GATCTGGCCG GGCTGGTGCG CGCCAACCTG CATCTCGCGG ATGTCGACGC CGAGCTTCAG CAGGCCATCG ATGCGACACG CCAGGGCCAT TACCGGGTCG GCGACATGAC CCAGGCCCTG ATCTGGGAGC AGTATCCGCT GCCCGTGGCG CTCGATACCC TGCGCGCCGG CAACGGTTAC GACATGATCC TCGAACCCAA CGCGGCCGAG GCGATCGTGC CACCGCAGGC GCCACGCGAT GATGTCTGGA TCAACAAGAC CGGCTCCACC AACGGCTTTG GCGGCTACAT CGTGATGCTT CCCGGCGAAC AGACGGGGCT GGTGATGCTG GCCAACAAGA ACTATCCCAA TGACGCGCGC GTCGAGGCGG CCTACCGCAT CCTGTCCGGC CTTGATGTGA TCGATGCGCT CTAG
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Protein sequence | MKGWLLGVSL TLLGASGVAQ AQAQDEASNK QVLDPIVASL MEAQQIPGMA VALIGPKGTT IADYGVADRK TGTPVDDDTL FEIGSLSKTL TATLASLAAV EGELDLEAPV SRYLPELEGS AFDRIDGLNL GTHTGGGLPL FVPDEVTDRA SLMAWYRDWQ PSEPIGESRT YSNLGIGLLG LEAAASLGGE FVPTMRTKVL APLGMRDTWY DVPEARMAHY AMGETKDGQP IHVSSGVLDD EAYGLKTTAA DLAGLVRANL HLADVDAELQ QAIDATRQGH YRVGDMTQAL IWEQYPLPVA LDTLRAGNGY DMILEPNAAE AIVPPQAPRD DVWINKTGST NGFGGYIVML PGEQTGLVML ANKNYPNDAR VEAAYRILSG LDVIDAL
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