Gene Csal_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0163 
Symbol 
ID4026232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp186583 
End bp187767 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content61% 
IMG OID637965314 
Productmethylitaconate delta2-delta3-isomerase 
Protein accessionYP_572226 
Protein GI92112298 
COG category[S] Function unknown 
COG ID[COG2828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTG CCCTGACATG CTCATATCAC GACTTTTCGA CGCGATATGG CATGACGATG 
ATGAACAGCA TTCCCTGCAT GATCATGCGC GGTGGTACCT CCAGAGGCCC TTTCTTGCGC
ATGAAGGACC TTCCCGATAA CCAGGCGGCG CAAGCCGAGA TCCTGATCAG CCTGATGGGG
TCGGGCCATG CTCTGCAGGT CGATGGCATT GGAGGCGGCG ACCCGCTGAC CAGCAAGGTC
GCCATTGTGG AGCGTTCATC GCACCCCGAG GCGGATGTCG ATTACCTGTT CGCGCAGGTC
GATGTGCTCA ATCGGCGTGT CGACTTCAAC CCGAACTGCG GCAACATGCT CTCGGCCGTC
GGTCCGTATG CCCTCGAAAC GGGACTGGTA GCGCTCCAGG AGGGGATGAC GACTGTTCGG
GTGCGCAATC TCAACACCCA GCGGTTGATC GAGTGTCATG TGCCGACTCC GGGAGGGCAA
GTCGCTTACG AGGGCGATAC GACGATCAGC GGCGTCCCCG GATGTGCCGC CGGCATCCAG
CTCGGTTTCC TGGATATCGT CGGCACCAAG ACGGGGGCGT TGCTGCCGAC CGGTAACGCC
ATCGACACGA TAGATGGCCT CCAGGTCACC TGCCTCGACG CTGCCACTCC CATCATGATG
GTCAACGCGG CCGACCTGGG CCTCAGTGGC CAGGAGTCTC CCGCTGAACT GGATGCTCAT
TCTGCCATGC TCGAGCGGCT GGAGTCGGTT CGTCGCGAGG CGGGGCTGCG AATGGGGCTG
GGGGATGTCA GCCAGAGCGT CTTGCCCAAG CCGGTGCTGG TATCGGCACC GATCGACGAC
GACAGTACGT TGTGCACTCG CTATTTCGTG CCTCATCGCT GCCACAAGGC CATTGCCGTC
ACTGGCGCCA TTGCGGTGGC CACGGCCGTC AGTGTGCCGG GCACCGTGGC CAACCGCATC
GTGGTTGAGG CAGGGAAACT GGAGGTTGAT GGTCAGCTGT CACAGGTCAG CCTGGAACAC
CCCTCCGGAT TCATCGATCT GGATGTCGAG CATCGCAACG GAAACCCCGT CGACATTGCC
CGCGTTTCCC TCATCCGCAC CGCCAGAAAG ATCATGAGCG GGACCCTTTT CTACTCGCTT
CCTTCGGCTC CCGGTCAGGA TATGCTGACA TCAAGAGCCA GCTGA
 
Protein sequence
MKSALTCSYH DFSTRYGMTM MNSIPCMIMR GGTSRGPFLR MKDLPDNQAA QAEILISLMG 
SGHALQVDGI GGGDPLTSKV AIVERSSHPE ADVDYLFAQV DVLNRRVDFN PNCGNMLSAV
GPYALETGLV ALQEGMTTVR VRNLNTQRLI ECHVPTPGGQ VAYEGDTTIS GVPGCAAGIQ
LGFLDIVGTK TGALLPTGNA IDTIDGLQVT CLDAATPIMM VNAADLGLSG QESPAELDAH
SAMLERLESV RREAGLRMGL GDVSQSVLPK PVLVSAPIDD DSTLCTRYFV PHRCHKAIAV
TGAIAVATAV SVPGTVANRI VVEAGKLEVD GQLSQVSLEH PSGFIDLDVE HRNGNPVDIA
RVSLIRTARK IMSGTLFYSL PSAPGQDMLT SRAS