Gene Csal_0138 details

Gene Information

• Locus tag: Csal_0138
• ID: 4026590
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 159826
• End bp: 160350
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637965289
• Product: cupin 2 protein
• Protein accession: YP_572201
• Protein GI: 92112273
• COG category: [S] Function unknown
• COG ID: [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCAAT CTATTGCGAC CTGGAAGCGC CCGGAAGACA TGTCGTTCAG CGACTGGATC 
GAATCGCGTG TGGCGCGTTT CGCGGGGCGT AAATACGACT GGAATGCGCT CAAGTTCCAG 
GCCGATTTCG ATCCCAAGTA TCGGCGCGCC CAGATGCGAT ATATCGGTAC TGGTGCGACG 
GGTGTCGCAG ACGATTCGAA CACGATTCCG GCCGAGCATT TCACCTTTTC GACCATGGTG 
CTGCCTTCCC AATGCGAAGG CCCCTTGCAT GTCCATGATG ATGTCGAAGA AGTCTTTTTC 
GTGCTCAAGG GCCGTATTCG CCTGTATCTC AAGGAAGGCG ACAACTACAC CGAGACCGTG 
CTCCACGAGC GCGATGTCGT GTCTGTTCCG CCTGGCATTT ATCGGGGCCT GCTCAACGAA 
AGCGAGGAAG AGGCACTCAT GTGCGTCATG CTGGGCACAC CCAAACCGCA GATTCCGACG 
TATCCGGACG ACCATCCGCT ATCCAAGATC AAGCGGCAAT CATGA 

 

Protein sequence

MTQSIATWKR PEDMSFSDWI ESRVARFAGR KYDWNALKFQ ADFDPKYRRA QMRYIGTGAT 
GVADDSNTIP AEHFTFSTMV LPSQCEGPLH VHDDVEEVFF VLKGRIRLYL KEGDNYTETV 
LHERDVVSVP PGIYRGLLNE SEEEALMCVM LGTPKPQIPT YPDDHPLSKI KRQS