Gene Nham_4657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4657 
Symbol 
ID4025807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007961 
Strand
Start bp108321 
End bp108749 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content61% 
IMG OID637965136 
ProductXRE family transcriptional regulator 
Protein accessionYP_572044 
Protein GI92109758 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCAT CGAAGATGGA CGTGCCCAAC ACAATGGTCT CTCCGGAGAC AGGAGAGACG 
CTGCGCCGCG GCGTTCGTCC CTTAATCGTG ACCTACAAGG GTAAGAGCAT CACGGTCGAA
CTGCCCGGTT ATTATCCGGA CAATGGCGAC GACGGCATCC ATGTCGGTGA CGACATGGCG
ATCACCGATG CGGCGCTTCG GATTTTGAAG GAAGAGATCG AAGGCATTCC CTCTCCCGCC
ACGATCAGAA GAGTGCGCGA GAAGCTCAAG CTGTCGCAGC GCGAGGCGGG CGGTCTGCTC
AAGGTGGGCG AGAACGCCTT CGATAAATAC GAGCGGGGCC TGGTCGAGCC AAGCGGTCCG
ACCAGCCAGT TGTTGCGGCT CCTCGACCAG CATCCGGAGC TGCTCGAGGA CTTGCGCGAG
AGCGCCTAA
 
Protein sequence
MAASKMDVPN TMVSPETGET LRRGVRPLIV TYKGKSITVE LPGYYPDNGD DGIHVGDDMA 
ITDAALRILK EEIEGIPSPA TIRRVREKLK LSQREAGGLL KVGENAFDKY ERGLVEPSGP
TSQLLRLLDQ HPELLEDLRE SA