Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4579 |
Symbol | |
ID | 4025347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007961 |
Strand | + |
Start bp | 33183 |
End bp | 34838 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637965078 |
Product | integrase catalytic subunit |
Protein accession | YP_571986 |
Protein GI | 92109700 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTCATG GGCCTGACAA GAACTCGGTC GATGAGAGTA CCTGGAGCGA GGCGGTTTCG AGGGAGGCCG TGATCCGACG ACTGGTGTCG CTTGACCGTC CCGGCCGGTC GGATTTCCTC CGCGCTTGCC ATGAACTCGG CGTCAAACGA ACCCGCCTCT ATGAGCTGAT CGGGGCCTAT CGCGAGCATC CCGTCGCGAG TTCACTGTTG CCGCGCCCGG CAGGCACGCG ACAAGGCAGT CGCCGATTGC CGGACGAGAC CGAAGCGGTG ATCGCCGAGG CGTTGCAGGA CTTCTACAAG ACACGCCAGA AGCCGAGCAT CAATCGGCTG CACAAGGAAA TCCGCCGGCT CTGCCGTGTG CGCGGCCTGC GGGCGCCATC CTGGCATGCT GTCAGAGCGC GGATCGCTGC GCTTGATCCT GCCGAACTCG CCATGGCGCG GGAGGGTCCG AAGGCCGCGC GGGACCGTTT CCGGCCCGTT CCGGGGCAAT ACGAAGCGGG GCATGCCTTT GCGGTTGTTC AGATCGATCA TACGCTGGTC GACGTGATCG TCGTTGATCG CCAGCACCGA CGGCCGCTGC AAAGACCGTG GTTGACGCTC GCCATCGATG TTGCGAGCCG CATGGTCGCG GGCTTCTATC TGACGCTCGA GGCGCCGTCG GCGGTTTCGG TTGCGCTCGC AATCCAGCAC CTCGTGCAGC CGAAAGAGCC ATGGCTTGCC GGACTGGGGA TCGATGCGGA TTGGCCGACC TGCGGATTCC CCGAGGCGAT CCATGTCGAT AACGCCAGGG AATTTCGGTC GCGCGCCCTG CGACGTGGCG CGGAGGAATA TGGCGTCGAA CTGATCCACC GGCCGGTCGC GACGCCCCAT TACGGAGGCC ATATCGAACG GCTGATCGGC ACGATGATGG GCGCGGTCCA TCTTCTGCCG GGCACAACCT TCAGCGATAT TGACGAGCGC GGCGATTATG ATTCAGCCGC CAATGCGATG ATGACGCTGG ATGAACTTGA ACAGTGGATG GCGCTTGAGA TCACGCGTTA CCATGCTGAT CGGCATGGAG CCTTGGGAAT CCCGCCGCTG GCGGCCTGGC ATGAAGCCTT GGCCCGCCGT GTCAGGCCCG TGTGTCAGCC CCATGATCTC GCCGGTTTCA TGATCGATTT CCTGCCTTCC GTTGACCGGC AGGTCCGACG CGACGGCATT CACCTGTTCG GCCTGCGTTA CTGGGATGAC ATCCTGAGCA TCTGGGCCGG CCGGCTCGAT CGGCCTTTGC GTGTGGCTTA CGACCCACGC GATCTTTCCA AGATCTACGT CAGGGCTCCG GATGGCACGC GCTGGCCGAT CCGCTTTGCC GATTTGCGGC GACCGCCGAT TACGCTGGGC GAGCATCGCC GCGCCCGGAC CGCCCTGCGG GAGCGCGGTC TGGCGCTTGT CGACGAGCAA TTGATCTTCG AGACCATCGA AGCCCAGCGC ATGCTGGTCG ATGAGGCCAC CCGGCGCACC AAAGCGGCGC GTCAGCTGGC CGAAAAGCGC GACCGCGCGC TCGGCGCCGC CACGGCGCAC AGCTCCTCGG CGCCGGCCGA GCCGAGGCAA GCCGAGGACG ATCGACCGAT CGACTGGAGC AAGGTGCCCA TCTTTCCCGT CGAGGAATGG TCGTGA
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Protein sequence | MVHGPDKNSV DESTWSEAVS REAVIRRLVS LDRPGRSDFL RACHELGVKR TRLYELIGAY REHPVASSLL PRPAGTRQGS RRLPDETEAV IAEALQDFYK TRQKPSINRL HKEIRRLCRV RGLRAPSWHA VRARIAALDP AELAMAREGP KAARDRFRPV PGQYEAGHAF AVVQIDHTLV DVIVVDRQHR RPLQRPWLTL AIDVASRMVA GFYLTLEAPS AVSVALAIQH LVQPKEPWLA GLGIDADWPT CGFPEAIHVD NAREFRSRAL RRGAEEYGVE LIHRPVATPH YGGHIERLIG TMMGAVHLLP GTTFSDIDER GDYDSAANAM MTLDELEQWM ALEITRYHAD RHGALGIPPL AAWHEALARR VRPVCQPHDL AGFMIDFLPS VDRQVRRDGI HLFGLRYWDD ILSIWAGRLD RPLRVAYDPR DLSKIYVRAP DGTRWPIRFA DLRRPPITLG EHRRARTALR ERGLALVDEQ LIFETIEAQR MLVDEATRRT KAARQLAEKR DRALGAATAH SSSAPAEPRQ AEDDRPIDWS KVPIFPVEEW S
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