| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4506 |
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| Symbol | |
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| ID | 4025517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 153924 |
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| End bp | 155606 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637965011 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_571919 |
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| Protein GI | 92109632 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCAT CGGGTTCTGG CTGCGGCTCC CGCAGCGTGG CGATTGCGCG AGATGATGCC
TGGGCGCAAG CGAAGCGCCA AGTGCGCGAA CTCGATCGGA TCCTTGATGG GCAAGGTCCG
CGGCAGGTGT CGATCGCGCG GGCGGCGGCT GAGCTCGGAC TCACGACCCG GCATATCTAC
AATCTGCTCA AGCGCTATGC GCCGGATCGG CGGATCACAG TGTTGCTGCC GCGGCGGGAC
AGGCCGCGAG CCACGCGGCT GACGGCACCC GTCGAGGCGG TCATCGCAGA GGTTCTGCGC
GAGCAGTGGC TGGTCAAGGA GGGGCCGGAA TTGCGTCCCT GCGTCGGCGA GATCCGGGCG
CGGTGCTGTG AGGCCGGCGA GCGCCCGCCC TCTTATCGCG CGGTTCAGCG GCGCATTCCG
ATGCTGTTCG AAGATCTCGC GATCGCCAAG GGCCGCTCCG CCAACCCCAG CCATGCGCGG
CGATTGAAGG CGCGACCCGG CTATATTTCG GCGAGGGGTC TGCTCGATGT TGGCCAGATC
GACCACACGC CGGCCGACAT CCAGTTCGTC GAGGTGATCG ACGGTGTCGG CGTCGTGGTC
GGACGGCCCT ATCTCACTGT CGTAATCGAT GTCTTCTCGC GTGCCATTCT CGGGTTCTGC
CTGACCCTGG AAAAGCCGAG TTCACTCTCG GTGGCGCTTT GCCTGCAACA GGCGCTGACG
CCGAAGGCCC CATGGCTCGC GGCGCATGGT CTTGGCGAAC ACGACTGGCC GATGTCCGGC
CGGCCACGCG TTCTGGTGGT CGATCGCGCC AAGGAGTTCA AGGGCCATGC TTTTGCCCGC
GGCTGCGACG ATTTCGGGAT CACGATCCGC CCGCGGCACA AGGGGAACGT TCATCAGGGC
GGCGTGATCG AGCGGCTGCT CGGCGCGCTC AATACGGTGC TGCGGACGCT GCCGGGCCAG
ACCGGCCGCT CGGTCACGGA GCGCGACCAC TATCCCTCGG AGGCCCGCGC CCGGCTCAGC
TTCGCCGATC TCGAACGCTG CGTCGCGCTC GCAGTGCTCG AGCACAACGC CAAACCGAAC
GAGAAGACCT TGGACATTCC CGATCAGGTC TGGCGCGCCC ATGCCGCTGG CTTGCCGCCG
CATCAAGACG ACCCCGACCA GGTGCTGATC GCCTTTCTTC CCGGCGGCGA TCGGCGGCTC
ACGCCTCAAG GCGTCAGCGT GAATGCGATC GACTATTATG CCCCATGGCT GGGCGAACTC
GTGCCGCGGC GCGACCGGGT CGGCAAACTC GCGATGCGCA CCGATCCGCG CGATCTGAGC
CATATCTATC TGCGCCATCC CGACACCGGA GCCTTCCTGG CCGTTGAGCG GCGCGATGGC
CGTACAGACG CAGTTACGCT GTGGGAGCAT GAGCACGCTC GCGCGATCAG GCGCGCGCTC
GGCGGTGGAC CTGAATCCCG GATCGCGCTC CGGCGCGCGC TCCGGGCGAT CGCGGATGGC
GCGATGCGCC CGGCCGTCGA ACCTGACACG CCAAAACCGG GCAAGCACGC GAGACGACAG
GCGGCGCGGA CGGCGCTTGC GCATGCCGCA CCGAAACCGC ATCAGGCGCT GGCCTCACAA
CCGGCGCGTT TTCCTGACCA CCCCGTGCGT GCGCGAAATC CACTGCCGGT CGAGGACTGG
TGA
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| Protein sequence | MAASGSGCGS RSVAIARDDA WAQAKRQVRE LDRILDGQGP RQVSIARAAA ELGLTTRHIY
NLLKRYAPDR RITVLLPRRD RPRATRLTAP VEAVIAEVLR EQWLVKEGPE LRPCVGEIRA
RCCEAGERPP SYRAVQRRIP MLFEDLAIAK GRSANPSHAR RLKARPGYIS ARGLLDVGQI
DHTPADIQFV EVIDGVGVVV GRPYLTVVID VFSRAILGFC LTLEKPSSLS VALCLQQALT
PKAPWLAAHG LGEHDWPMSG RPRVLVVDRA KEFKGHAFAR GCDDFGITIR PRHKGNVHQG
GVIERLLGAL NTVLRTLPGQ TGRSVTERDH YPSEARARLS FADLERCVAL AVLEHNAKPN
EKTLDIPDQV WRAHAAGLPP HQDDPDQVLI AFLPGGDRRL TPQGVSVNAI DYYAPWLGEL
VPRRDRVGKL AMRTDPRDLS HIYLRHPDTG AFLAVERRDG RTDAVTLWEH EHARAIRRAL
GGGPESRIAL RRALRAIADG AMRPAVEPDT PKPGKHARRQ AARTALAHAA PKPHQALASQ
PARFPDHPVR ARNPLPVEDW
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