| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4365 |
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| Symbol | |
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| ID | 4025225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 12054 |
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| End bp | 13295 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637964880 |
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| Product | major facilitator transporter |
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| Protein accession | YP_571788 |
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| Protein GI | 92109501 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTCT TGATGGCGTC GGTGTTCACA GTGTCGATTG GCTACGGTGT GGTACTGCCT
CTGCTCCCAT ATCTCATAGA GCGTCTGCTC GGCGCGGCTG CCGATGCGGC GCAAGTATCG
CGCTCGACCG GGCTGCTGAC AGGCCTCTAC ACATTGGCTC TCTTTCTCTT TGCTCCGGCT
TGGGGACACA TGTCTGACCG GTACGGACGT CGCATCATCC TTCTGATCGG TTTGATCGGT
TTCAGCGCCA CCATGTTGAC CTTCGCATTC ATCGAGAACC TGACGGCGGT TTACGCCGAG
CGTTTCTTGA GCGGTATGTT CGCCGCTGCG GTGACGCCGG GCGCGCTGGC CACGATCGGG
GATCTCGCAG CGACAGATGA GGCACGAGCG CGCCGCCTCA CCTTCGTCAG CCTAGCGGGA
ATCAGCGGGT TTCTGCTCGG ACCTATGCTT GGCGTCTTCG TTGTGCGGAG CGCAGGGAGC
CTGCTCCCGA TTGGCGGCGG GGCCGGAGCA CTGACCTTGC CACTGGCGGG GACTGCGGTC
TTGGCGCTTC TTGTGGCGGC CGCTGCCGCC GTGACCGTAC CTGGAGTGAA GCGGGGCGAT
GCTACCCCCA AGCGCGACCG AGCAGATCTG GCGCCTAGCC GCTGGCTCGT TCCCAAGCTG
CTTACCCTCG CATTCGTCGT CTCTGCTGGA GTGGGTGTGT TCGAGGTTGG ATTAGCGCTT
CGCGGCAAAC AGGAACTCGG GCTCACCCAA TACCAGATTG CGCTGATGTT CACCGAGTGC
AGCTCTGTGA TGTTGGTCGT GCAATCGATC GTCTTCTCGC CTTGGATCAA ACCCAAGACC
ACGCGCTGGT TTATTGCGCC GGCTCTCGCC ATCTTGGCGG CAGGATTATT CCTTGTCCCA
CGTGCGCCGG ACTTCACGCT GACGCTCGCG GTGATCGGGG CGGTGGCGGC GAGCGCCGGT
ATTCTCTCTC CGATCCTGAC CTACTGGATA TCGATCAAGG CCGGCAAGGC GCAGGGAGCG
GAACTTGGCA AGCAAACGGC CGCATCAAGC CTTGGTGCTG CCGTGGGGTC CGCAGCCGGA
GGACTCCTCT TCGATGTTGC GCCGCTGCCG CACGCCTCGT TTTTGCTGGT AGCTGTGCTA
ACCGTCCTGG GTGTCCTGTT GAGTCTCGGC CTTCCGAATG CGCTTGTGAC GCGGAAACTC
GGCGAAGCCG CCTGCAACGG GGAGGGCCGC GCCGTGTCTT AG
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| Protein sequence | MAVLMASVFT VSIGYGVVLP LLPYLIERLL GAAADAAQVS RSTGLLTGLY TLALFLFAPA
WGHMSDRYGR RIILLIGLIG FSATMLTFAF IENLTAVYAE RFLSGMFAAA VTPGALATIG
DLAATDEARA RRLTFVSLAG ISGFLLGPML GVFVVRSAGS LLPIGGGAGA LTLPLAGTAV
LALLVAAAAA VTVPGVKRGD ATPKRDRADL APSRWLVPKL LTLAFVVSAG VGVFEVGLAL
RGKQELGLTQ YQIALMFTEC SSVMLVVQSI VFSPWIKPKT TRWFIAPALA ILAAGLFLVP
RAPDFTLTLA VIGAVAASAG ILSPILTYWI SIKAGKAQGA ELGKQTAASS LGAAVGSAAG
GLLFDVAPLP HASFLLVAVL TVLGVLLSLG LPNALVTRKL GEAACNGEGR AVS
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