Gene Nham_4281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4281 
Symbol 
ID4025213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand
Start bp229626 
End bp230849 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content58% 
IMG OID637964810 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_571718 
Protein GI92109430 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR03453] plasmid partitioning protein RepA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAAAA CACTAGATCA GACCACCCTG CAGCAGGAGT CCGGTCGACT TGCGATCCAC 
GAGCTTATCG CGGCGGACGC ACGAGAGCTA TCTGCAAAAC TGCAGGCTCA CCGACTCAAG
CTGTTTCCCC CAAAAGCCAG GAAGAAGCTT CGGCCATTCT CCTCAGGAGA GGCAGCCAAG
CTCATCGGCG TCAACGACGG CTACCTCCGA CAGCTCTCGC TCGAGGGCAA AGGCCCACAG
CCAGAAACGA GCTCATCCGG ACGGCGGTCC TATACATTCG ACGATATTCA GGCGCTCCGG
ACCTACTTAG ACGAGACCGG CAAAAGTACG CGCCGTTACC GTCCTTGGCG CGCGGAGGGC
GAACACCTGC AAGTCATCGC CGTCGTCAAC TTCAAGGGAG GCTCAGGAAA GACAACGACG
GCGGCGCACC TAGCGCAACA CCTGACCCTT CAGGGATACC GCGTACTGGC AGTCGACCTC
GATCCCCAGG CATCGCTTTC GGCGTTGCAT GGGTATCAAC CGGAGTTCGA CATCGAAGAG
AACGGGACGC TCTACGGCGC CATTCGCTAT GACGACGCCC GGCGCGATCT GTGCGACATA
ATTCGTCCCA CATACTTTTC GGGGCTCGAC ATCATCCCGG GCAACATCGA GCTCATGGAA
TTCGAGCATG AAACCCCAAA AGCCCTAGCG TCTCGGCAGA CGGGTGATCC GCTTTTCTTT
TCGCGTGTCG CGCGCGCTCT TGCTACGGTT GAAGACAAGT ACGATGTCGT GGTGATCGAC
TGCCCGCCAC AGCTCGGATT CCTAACACTG TCGGCGCTCT GCGCCGCGAC AGCGCTTTTG
ATCCCAGTGC ACCCGCAAAT GCTCGACGTG ATGTCGATGT GTCAATTCCT CATCATGACG
TCGGACCTGA TGGCCGTCGT GGCCAAAGCA GGGGGCAACA CGAACTACGA TTGGATGCGA
TACCTGGTGA CGCGTTACGA ACCCAGTGAC GGTCCGCAGA CGCAAATGGT GAGCTTCATG
CGCTCGCTCT TTTCTGACAG GGTTTTGACC AATATGGTGC TGAAGAGCAC CGCCATCTCC
GATGCGGGCA TCACCAAACA GACGCTGTAT GAGGTGGAAC GCCAGCAATT CACGCGCGCC
ACCTACGATC GCGCGATCGA GTCACTCGAT AGCGTAAACG GCGAAATCGA GAAGCTCATT
CAAGAAGCAT GGCGGAGGGG TTGA
 
Protein sequence
MDKTLDQTTL QQESGRLAIH ELIAADAREL SAKLQAHRLK LFPPKARKKL RPFSSGEAAK 
LIGVNDGYLR QLSLEGKGPQ PETSSSGRRS YTFDDIQALR TYLDETGKST RRYRPWRAEG
EHLQVIAVVN FKGGSGKTTT AAHLAQHLTL QGYRVLAVDL DPQASLSALH GYQPEFDIEE
NGTLYGAIRY DDARRDLCDI IRPTYFSGLD IIPGNIELME FEHETPKALA SRQTGDPLFF
SRVARALATV EDKYDVVVID CPPQLGFLTL SALCAATALL IPVHPQMLDV MSMCQFLIMT
SDLMAVVAKA GGNTNYDWMR YLVTRYEPSD GPQTQMVSFM RSLFSDRVLT NMVLKSTAIS
DAGITKQTLY EVERQQFTRA TYDRAIESLD SVNGEIEKLI QEAWRRG