| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4179 |
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| Symbol | |
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| ID | 4025565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | - |
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| Start bp | 136913 |
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| End bp | 138586 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637964726 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_571634 |
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| Protein GI | 92109346 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.263418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG TTGCGATCAG CGGCGAACTT CCGCTTCCGC GCGAACCCAG CTACCTCGCT
GCCGGCCACA CCGTGGCATC GTGGCTTGCC ACGACGGACC ATAAGCGCAT CGCGATCTTG
TATGCGGCGA CGATTACCTT TTTCTTCTTT CTCGGCGGCA TTGCGATCTC ACTGGTCAGG
CTGGATCTGT TTACGCCGGC AGGTGATTTG CTTTCGGACG ATACTTACAA CAAGCTTTTC
ACTTTCCATG GCGTAATCAT GGTTTGGTTC TTCATGGTGC CGTCGATTCC CGGCACTTTT
GGCAATTTCC TGCTGCCATT GATGATCGGC GCGCGAGATG TCGCATTTCC GCGCCTCAAT
CTGTTCAGCT GGTATCTCAT CGTGACCGGT GGCGCATGTA CGCTGTACGC ACTGATCGCC
GGCGGCGTCG ATACCGGATG GACCTTCTAT ACCCCGTTCT CGACCATGTT CTCCAACACG
CACGTCATCG CAGCGGCGCT CGGCGTGTTT ATCGCGGGAT TCTCCTCAAT CGCCACGGGC
GTGAACTTCA TCGCGACGAC GCACATGCTA CGCGCGCCCG GCATGACCTG GTTTCGCCTT
CCGCTCTTCG TCTGGGCGAT CTACGCAACA AGCCTCGTGA TGGTGCTGGC GACGCCCGTA
CTCGCCGTTA CGCTGCTTCT TGTGATCGCG GAGCGCTGGC TGCATCTGCC CATCTTCAAT
CCCGATTTTG GCGGCGATCC GCTGCTGTTC CAGCACCTGT TCTGGTTCTA TAGCCATCCC
GCGGTCTACA TCATGGTCCT GCCGGCAATG GGGGTCATTT CGGAAGTCAT CACATGCTTC
GCCCGTCGCC GCGTCTTCGG CTACGACTTC ATGGTTTACG CCATGGTCGG GATCGCAGTG
ATCGGCTTTT TCGTCTGGGG CCACCACATG TTCGTATCGG GCCAGTCGCC TTACGCGAGC
CTTGTTTTCT CGTTTCTGTC CTTCATCGTC GCGGTGCCAT CCGCCATCAA GGTGTTCAAC
TGGACGGCGA CGCTTTATCG CGGCCAGATC AGCTTCGATG CTCCGATGCT TTATGCGCTG
GGCTTTCTGG GGCTGTTCAC GATCGGCGGT CTGACCGGAC TATTCCTCGC GTCGATTCCG
GTCGATGTTC ACGTAACCGA TACCACCTTC GTGGTCGCGC ATTTCCATTA CATCATGGTA
GGTGGCACGG TCTCTGCTTT TTTTGCGGGA CTGCACTACT GGTGGCCGAA GATCACCGGA
CGTTTGTATC CCGATGTTTG GGCGCGTTTC GCCGCCATCC TGATGTTCTT TGGCTTTAAC
TTCACGTTCT TTCCACAATT CATCGTTGGC TATCTGGGAA TGCCGCGGCG TTACCATGTC
TACCCGCCCG AGTTTCAGCT CTACAATGTC CTGTCCTCGG CGGGAGCTTT CGTGCTTGCC
GCCGCCTACC TTTTGCCGCC TCTTTATCTG ACCTGGTCCT TGATATGGGG CGCCCGAGCG
GGCCGAAATC CCTGGAACGC CACAGGTCTC GAGTGGAAGA CAAGCTCGCC TCCTTCACGG
GAGAATTTCG CAGCAACGCC TCATGTCGAA GAAGGTCCTT ATCGCTACCA TCCGGAAGGC
TTCGCCCCGG AACACGGCGA AGATAACTAC CGCACTGAGG GAGATCGGGC GTGA
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| Protein sequence | MTDVAISGEL PLPREPSYLA AGHTVASWLA TTDHKRIAIL YAATITFFFF LGGIAISLVR
LDLFTPAGDL LSDDTYNKLF TFHGVIMVWF FMVPSIPGTF GNFLLPLMIG ARDVAFPRLN
LFSWYLIVTG GACTLYALIA GGVDTGWTFY TPFSTMFSNT HVIAAALGVF IAGFSSIATG
VNFIATTHML RAPGMTWFRL PLFVWAIYAT SLVMVLATPV LAVTLLLVIA ERWLHLPIFN
PDFGGDPLLF QHLFWFYSHP AVYIMVLPAM GVISEVITCF ARRRVFGYDF MVYAMVGIAV
IGFFVWGHHM FVSGQSPYAS LVFSFLSFIV AVPSAIKVFN WTATLYRGQI SFDAPMLYAL
GFLGLFTIGG LTGLFLASIP VDVHVTDTTF VVAHFHYIMV GGTVSAFFAG LHYWWPKITG
RLYPDVWARF AAILMFFGFN FTFFPQFIVG YLGMPRRYHV YPPEFQLYNV LSSAGAFVLA
AAYLLPPLYL TWSLIWGARA GRNPWNATGL EWKTSSPPSR ENFAATPHVE EGPYRYHPEG
FAPEHGEDNY RTEGDRA
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