Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4172 |
Symbol | |
ID | 4025558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | - |
Start bp | 128836 |
End bp | 129198 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637964720 |
Product | ISSpo6, transposase orf A |
Protein accession | YP_571628 |
Protein GI | 92109340 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3415] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.311615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGG CGCTTTCCGT TGATCTTCGC CAAAGGGTGG TGGCCGCGAT TGACGGTGGC TTGTCCTGTC GACAGGCCGC CGAGCGTTAT GGTGTCAGCG CGGCCAGCGC GATCCGCTGG CGCACTCGCC TCAAGGAAGT TGGCGACATC GTTCCTAAAC GCCAGGGCGG AGACCGCAAA TCGCAGCGCA TCGAAGCACA TTCACAATTG ATTTTGGACG CGGTGACAGC GAAGCCGGAT ATCACGCTCG CCGAGTTGCG AGACCTGTTG AAACGTCGTG GAATATCGGC CGGCATTGCT TCGCTCTGGC GTTTCTTCCA GCGCAGAAAG ATCACACTTA AAAAAAGACA GCGCATGGAT TGA
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Protein sequence | MTKALSVDLR QRVVAAIDGG LSCRQAAERY GVSAASAIRW RTRLKEVGDI VPKRQGGDRK SQRIEAHSQL ILDAVTAKPD ITLAELRDLL KRRGISAGIA SLWRFFQRRK ITLKKRQRMD
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