Gene Nham_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4172 
Symbol 
ID4025558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand
Start bp128836 
End bp129198 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content57% 
IMG OID637964720 
ProductISSpo6, transposase orf A 
Protein accessionYP_571628 
Protein GI92109340 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.311615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGG CGCTTTCCGT TGATCTTCGC CAAAGGGTGG TGGCCGCGAT TGACGGTGGC 
TTGTCCTGTC GACAGGCCGC CGAGCGTTAT GGTGTCAGCG CGGCCAGCGC GATCCGCTGG
CGCACTCGCC TCAAGGAAGT TGGCGACATC GTTCCTAAAC GCCAGGGCGG AGACCGCAAA
TCGCAGCGCA TCGAAGCACA TTCACAATTG ATTTTGGACG CGGTGACAGC GAAGCCGGAT
ATCACGCTCG CCGAGTTGCG AGACCTGTTG AAACGTCGTG GAATATCGGC CGGCATTGCT
TCGCTCTGGC GTTTCTTCCA GCGCAGAAAG ATCACACTTA AAAAAAGACA GCGCATGGAT
TGA
 
Protein sequence
MTKALSVDLR QRVVAAIDGG LSCRQAAERY GVSAASAIRW RTRLKEVGDI VPKRQGGDRK 
SQRIEAHSQL ILDAVTAKPD ITLAELRDLL KRRGISAGIA SLWRFFQRRK ITLKKRQRMD