| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4056 |
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| Symbol | |
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| ID | 4025382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | - |
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| Start bp | 19058 |
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| End bp | 20899 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637964643 |
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| Product | HipA-like |
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| Protein accession | YP_571551 |
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| Protein GI | 92109263 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.970389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTGC ATCTGGTTGG AGAAAACATC GATAAAGCCC GCAGCCACTA TCAGGCTGAA
ACGGGCAAAC TCGTCCAGCT GATGCGCGGC ATCTACGTTG ATGCGGGAGA GGACATCGAG
GCGACGGTAC TCAAGCACGC CGTCCGTATC GCAAAATACC TATACCCCAA TGCCTACCTG
TCAGCGGCGA GCGCTGTCCT TCTTGGCCCG ACCCGCGACG GTCGCCTGTT CCTGAGCGGG
CGGAGAATAC AGCGCACGCG ATTACGCTCA CTTGAAATCA TCCAGAATGC AGCGCCCGAC
CATCCGTCGG TCGCCCCCGC GATTGTCGAT GACGGCATGG GAGAATTTCG CATCGATGTC
TCGTCGATGC GCCAGCGCTT CCTCGAAGCG TTCCGTCTGC GCAGCGAGCA CGCCGCATCC
ATTGATGAAA CGACGCGCGA GACAATAGCG AACCGTCTTA TTGAAGAATA CGGCACCTCT
CAGGGGGCTG CCGATGCAAC CTGGTCACTC GCCCGCGAGA ACAAATGGTA TCGCGAGGGC
GAGCACGCCG AGCGCTTCCT GCTCCGCCGC CCAGTGTCGG GAGAGCCTGC ACGCAACGAA
GCTGCGCTCG ATCTGATCGT GGCGTGGCAC GGCGTTCCGC TCGGCAACCT CACTCATGAT
GGCTTTGAAT GGCGCTGGAA TCCCAACAAT CAGAACGGCC CACCGCTCGT CCGCCAAACC
ACGCCGGGTA AACTCCCGCC TTTCATTCTA TCATTGCTGC CCGAAGGCTG GCTTGAGTCA
GTCCTGAACG ACCGCGACGA GCGCGCGATG CTGCGCTCCG GCAAGCGCTA CATGTCAAAC
GTCACAATCG TTGAGCGCGA GAGCGATCTC GCCGCTCTGC CGCCCGACAT ACTGCTGACC
CGGCTCGAAC GCTTCACTGA GAACTCACTA TTCACCGGTA GGTATGCGGG GCCAGGTCGC
GGCGATTTAG AGCAAAGCTT CGAGCGCAAT CTCGCGGAGA TATTTGCGCG CACGGATACG
CCGCGATTAT CAGGCGTTCA GATCAAAGCG CCGATGTTCC TTGATTCTGA CGGTACGCTC
TCCCCCAGCA CCGGCAAGCC CTTCACGCAT ATTCTGAAGC CTGCTGGCAC AAGCGGATTT
GAGGCCCTGC CGGTTATCGA ATGGCAGTCA CTCGCATTGG GCCGCGCATC CGGCTTTCTA
ACGCCTGCGA CGGCGCTTGT TCCCATGCCT GACGGGATGC CGCCCGCGCT CTTGGTGGAG
CGGTTCGATA TCAGGACAAG CCTTGATGAC AAACGCCTCC TGGCGCTTGA GGATTTTTGC
TCCGTGCTGG GCGTGCCGAC CGAAGCAAAA TACGACGGCA CGATGGAGCG CATCGCGCGG
GCTCTAAGAC CCCTATCAAC AGCGCCGGAA GAAGATGTCT TGCTTGTGCT GAAGCGAGCC
TTGTTCGCCT GGCTGATTGC CGACGGCGAC ATGCACCTGA AGAACATGGC GCTCCTCAAG
GTCGCAGAGC CGGGCAGCGC GCAATTCAAC TCCGTCCGCA TGGCACCGCT CTATGATGCG
GTCACAACCC GCGTCTTTCC AAGGTTGGAA AGAGACCGGA TGGCGCTCAA ACTGAACGGC
AAAGACGACC GTCTGCGCCG CTCTGATTTC AAGGCATTTG CCAGCACCGC CGGTCTCAAG
GCTGCCGATG CGGATACCGC CATCGACGAT CTCGTGACCG CCCTCTTGCG CGCGCTCGAT
CATCTGGAAT TACCGCCACT TTTATCTGAC GGCACTCAAG GCGCGAAGAT CGCGGAGCAG
ATGCGCGCGA TTGTCCGCGA ACGCATTGAA GGGTTCGCGT AG
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| Protein sequence | MPLHLVGENI DKARSHYQAE TGKLVQLMRG IYVDAGEDIE ATVLKHAVRI AKYLYPNAYL
SAASAVLLGP TRDGRLFLSG RRIQRTRLRS LEIIQNAAPD HPSVAPAIVD DGMGEFRIDV
SSMRQRFLEA FRLRSEHAAS IDETTRETIA NRLIEEYGTS QGAADATWSL ARENKWYREG
EHAERFLLRR PVSGEPARNE AALDLIVAWH GVPLGNLTHD GFEWRWNPNN QNGPPLVRQT
TPGKLPPFIL SLLPEGWLES VLNDRDERAM LRSGKRYMSN VTIVERESDL AALPPDILLT
RLERFTENSL FTGRYAGPGR GDLEQSFERN LAEIFARTDT PRLSGVQIKA PMFLDSDGTL
SPSTGKPFTH ILKPAGTSGF EALPVIEWQS LALGRASGFL TPATALVPMP DGMPPALLVE
RFDIRTSLDD KRLLALEDFC SVLGVPTEAK YDGTMERIAR ALRPLSTAPE EDVLLVLKRA
LFAWLIADGD MHLKNMALLK VAEPGSAQFN SVRMAPLYDA VTTRVFPRLE RDRMALKLNG
KDDRLRRSDF KAFASTAGLK AADADTAIDD LVTALLRALD HLELPPLLSD GTQGAKIAEQ
MRAIVRERIE GFA
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