| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4390 |
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| Symbol | |
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| ID | 4024915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4855893 |
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| End bp | 4858007 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964599 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_571507 |
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| Protein GI | 91978848 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCC CTTCCGATGC CGTTCAACGG CATCCGTCCG CGCTGTCGCG CGCATTATTG
TCGTCCACCA TTCTTGCGTC GAGCCTGCTC GCGACCGCTG CGCCCGCTTT GGCTCAGAAC
AATGCGCTGC CGACCATCAA CGTTACCGCC AGCCGTCTGT ATCAGGGCAT CGTCGGCGCC
TCGACCACGG TGATCACCGC CGACGACATC GCGCATTCGC CGGCGCAAAC CGTGCAGGAC
GTGATCGCGC AGACGTCCGG CGTGCAGAGC ACGTCACTGT ATGGCGGCGT CAACGGCACC
GGCTCGTCGG TCGATCTGCG CGGCTTCGGC GCCACCGCGA CCTCGAACAC GCTGTTCCTG
GTCAATGGTC GCCGCCTCAA CGACCTCGAT TTGCAGGGCG TCGACCTGTC GAGCATCCCG
CTGCAATCGA TCGAGCGCAT CGAGATCACC CGCGGCGGCA GCGGCGCGGT GCTGTATGGC
GACAATGCGG TCGGCGGCGT CATCAACATC GTCACCAAGA CCGGCGCCGG CGGCCCGCCC
GCGACGTTCC GCGTCGAAGG CGGCTTCGGC TCGTTCAACC AGCGGCTGGC GGCCGTGTCG
GCGGCTTACA ATTACGGCCC GTGGTCGACC TCGGCGTTCG CCAACGGCGT GCGTTCCGAC
GGCTATCGCG CCAACAATGC GCTGGAGCAG AACAACGCGC TCGGCGAGCT GCGCTATTCC
ACGCCGGATC TCAGCGCGTT CCTCAACATC TCGGGCGACA ACCAGCACCT CGGCCTGCCG
GGTTCCCGGA TCGTCGACCC TTCGATCGGC GTCAACCAAC TCCAGACCGA CCGCCGCGGC
ACCAATACGC CGTTCAACTA TGCCGACAAG CAGGGCGTCA ATGTCACCGC CGGCTTCACC
AAATCGCTGT GGGACGGCGC CGAACTGATC GTCGACGGCG GCGTCCGCGA TAAGCGCCAG
CAGGCGGGAT ATTTCGGCGA CGTGCCGCTG TCGAGCTTCA ACGCCAGTTC ATTCGACGCG
CATCTGCGGA CCTGGTCGAT CACGCCGCGG CTGAGCATCA AGAATTCGAT CTTCGGACTG
CCGTCGAAAA TCCTGACCGG CCTCGATTAT TACGACGCGA CCTATGATTC CGACCGCGGC
CAGTATCGCA GCACGCCGCC GGTCCACGTC TATAATCTGT CGCAGAAGAC CATGGCCGGT
TACTGGCAGC AGACCGTCGG CCTCCTGCCG ACCACGGACT TTTCGTATGG CGGCCGGCTG
CAGGGCGTCA AAATCGAGGC GACCGATCGT CTCAACCCGG CGGCGCCGGG CTATTTCGGC
GACGCCCAGG CGTTGCCGCT CAGCAGCACC GAGACCCAGC ACGCGCTGCA TGTCGGGCTC
GAGCATCGCT TTAACGACGT GTTCAGTGTG TTCGCACGCG CCGCACGCGC ATTCCGCACG
CCGAATGTCG ACGAGCGCGT GGCGTCGGGA CCGTCCTACG ACCCGTTCTT CAATGCGATT
CCGGGCACCT TCAACCTGAA GACCCAGACC TCGGTCGACT TCGAGGGCGG CTTCCGCGTC
AAGTCGGGCC CGTTCGAGAT GCAGACCAGC GCCTACAATA TGAACCTGAC CAACGAGATC
CGCTACGATC CGGTGAATTT CTACAACACC AATCTCGACC CGACCCGGCG CTATGGCGGC
GAGACCAGCG CCTCGCTTCG CATCAGCGAC ACGCTGCTGC TGCGCGGCGG CGGCGCCTAT
ACCCGCGCGA CGTTCCGCGA AGGACCGTTC GAGGGCAACG ACGTTCCGCT GGTGTCGCGC
TATACGGCGA ACGCCGGCGT GACCTGGAAC GTCTGGCAGA AATACGTCGT GTTCGACGCG
ACCGCCCGCG CCTGGAGCAA TCGCTTTATG GACAGCGACA ACAGCAACAG GCAGACGAAG
ATCCCGGCCA ACGCCACCGT CGACATCAAG CTGAGCGGCG AACTCGACCA TTTCTTCTGG
TCGCTCAGCG TGATCAACCT GTTCAACGCG CAGTATTACG ACTACGCGGT GGCGAGCAGC
TTCACGCCCG GCCGCTACGG CGCCTATCCG CTTCCTGGCC GGACATATCT CGTCAAGGCC
GGTGTGACGT TCTGA
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| Protein sequence | MPSPSDAVQR HPSALSRALL SSTILASSLL ATAAPALAQN NALPTINVTA SRLYQGIVGA
STTVITADDI AHSPAQTVQD VIAQTSGVQS TSLYGGVNGT GSSVDLRGFG ATATSNTLFL
VNGRRLNDLD LQGVDLSSIP LQSIERIEIT RGGSGAVLYG DNAVGGVINI VTKTGAGGPP
ATFRVEGGFG SFNQRLAAVS AAYNYGPWST SAFANGVRSD GYRANNALEQ NNALGELRYS
TPDLSAFLNI SGDNQHLGLP GSRIVDPSIG VNQLQTDRRG TNTPFNYADK QGVNVTAGFT
KSLWDGAELI VDGGVRDKRQ QAGYFGDVPL SSFNASSFDA HLRTWSITPR LSIKNSIFGL
PSKILTGLDY YDATYDSDRG QYRSTPPVHV YNLSQKTMAG YWQQTVGLLP TTDFSYGGRL
QGVKIEATDR LNPAAPGYFG DAQALPLSST ETQHALHVGL EHRFNDVFSV FARAARAFRT
PNVDERVASG PSYDPFFNAI PGTFNLKTQT SVDFEGGFRV KSGPFEMQTS AYNMNLTNEI
RYDPVNFYNT NLDPTRRYGG ETSASLRISD TLLLRGGGAY TRATFREGPF EGNDVPLVSR
YTANAGVTWN VWQKYVVFDA TARAWSNRFM DSDNSNRQTK IPANATVDIK LSGELDHFFW
SLSVINLFNA QYYDYAVASS FTPGRYGAYP LPGRTYLVKA GVTF
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