Gene RPD_4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4388 
Symbol 
ID4024913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4854763 
End bp4855446 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content68% 
IMG OID637964598 
Producthypothetical protein 
Protein accessionYP_571506 
Protein GI91978847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.792294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAT ATGTGGTCGA GTTCGGCAAG GATGGTCGGC CGTTGGAGCC TGATGGCCGG 
CTCGACGCCG CCGCGTTTCA CCGCAATCAG CAGGCGATTC GCGACGTGCT CGGCCGGCTG
TTGCGCGGAA CGACGGGGGA CGTGCTGGAG GCTGGTAGCG GCACCGGCCA GCACGTGATC
GCGTTCGCCC GCCAGCATCC CGAGATCGTC TGGTGGCCGA GCGATCTTCA TCCGCGGCAT
CTGCTGAGCA TGGCCGCCTG GCGCGCTTAT GCGGGGCTCG GCAATGTGCG GCCTCCGCTG
CGGGTCGATC TGTCCGATCC CGTGTGGTGC GCCGAGATGA CCGACGGTCG CGGGCCCGGT
CCGCTGGCCG CGGTGTTTTG CGCCAATGTC GTGCACATCG CGCCGTGGCC GGTCGCGGGG
GGACTGTTCG CCGGCAGCGC GCGCTATCTG CGGCCGGACG GGCGGTTGAT TCTCTACGGG
CCGTTCAAGC GCGACGGCCG CCACACCGCG GACAGCAATG CGGTGTTCGA CACCAGCCTG
CGGTCCGCCA ATGCGGAGTG GGGCGTGCGC GATGTCTCTG AATTGGAGCA ACTCGCGACG
GGGCTCGGGC TGGTTCTGCG CGAGACCGTC GAGATGCCGG CCAACAATCT GATCCTGTGC
TTTTCCCGCA GCGGCGAAAG CTGA
 
Protein sequence
MTEYVVEFGK DGRPLEPDGR LDAAAFHRNQ QAIRDVLGRL LRGTTGDVLE AGSGTGQHVI 
AFARQHPEIV WWPSDLHPRH LLSMAAWRAY AGLGNVRPPL RVDLSDPVWC AEMTDGRGPG
PLAAVFCANV VHIAPWPVAG GLFAGSARYL RPDGRLILYG PFKRDGRHTA DSNAVFDTSL
RSANAEWGVR DVSELEQLAT GLGLVLRETV EMPANNLILC FSRSGES