| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4348 |
|---|
| Symbol | |
|---|
| ID | 4024872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4812597 |
|---|
| End bp | 4813310 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637964557 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_571466 |
|---|
| Protein GI | 91978807 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1678] Putative transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTG AGTCCAAAAG GCCCAAGTCC GGCGAAGCCA AGCCCAAGTC CGGCGAAGCC
AAGCCAAAAT CAGGCGAAGC CAAGCTGAGG TCCGGCGCCA AGCGGAAGGC CGGCGAATCT
TGGTCGGGCG AGCAGGGGAG CTATCTCGAC GGCCAGTTGC TGATTGCGAT GCCGGTGATG
GAAGACGAGC GTTTTGCGCG CTCGGTGATC TATATCTGCG CGCATTCATC CGAAGGCGCC
ATGGGCATCA TCGTCAATCG TCCCGCGGGC AGCATCGATT TTCCGGAACT GCTGGTTCAG
CTCGACATCG TCGAAAAGCC CGAGCAGATC ATGCTGCCGG ATCACGCCGA ATCCATGAAG
GTGTTGCGTG GGGGGCCGGT CGAGACCGGC CGGGGCTTCG TGCTTCATTC CAGCGATTTC
TTCATCAAGG ATGCGACCCT GCCGATCGAT GACGGCATTT CTCTGACCGC GACCGTGGAT
ATTCTCAAAG CGATCGCCAG CGGCGCCGGC CCGAAGCACG CCATCCTGGC GCTCGGCTAT
GCCGGCTGGG CGCCGGGCCA GCTCGAGACC GAAATTCAGG ACAATGGCTG GCTGCATTGC
GACGCCGACG CGGACCTGGT GTTCGGCGAC GACGTCGAAG AGAAATACGA TCGCGCGCTG
CACAAGCTCG GTATCGAGCC GGGGATGCTT TCCACCGAAG CCGGCCACGC GTAG
|
|---|
| Protein sequence | MAIESKRPKS GEAKPKSGEA KPKSGEAKLR SGAKRKAGES WSGEQGSYLD GQLLIAMPVM
EDERFARSVI YICAHSSEGA MGIIVNRPAG SIDFPELLVQ LDIVEKPEQI MLPDHAESMK
VLRGGPVETG RGFVLHSSDF FIKDATLPID DGISLTATVD ILKAIASGAG PKHAILALGY
AGWAPGQLET EIQDNGWLHC DADADLVFGD DVEEKYDRAL HKLGIEPGML STEAGHA
|
|---|
| |