Gene RPD_4317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4317 
Symbol 
ID4024841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4784004 
End bp4785032 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content65% 
IMG OID637964526 
Productfructose-bisphosphate aldolase 
Protein accessionYP_571435 
Protein GI91978776 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3588] Fructose-1,6-bisphosphate aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.280107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.443925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCG CCGACCTCAA CAAGATCGCC CGCGCCATGG TCGTCCCCGG CAAGGGCATT 
CTCGCCGCCG ACGAATCCTC GGGAACCATC AAGAAGCGCT TCGACGTGAT CGGCGTCGAA
TCCACCGAGA CCAGCCGGCG CGACTATCGC GAGATGATGT TCAGCTCCAA GCAGGCGATG
AGCGAGTACA TCTCCGGCGT GATCCTGTAC GACGAGACGA TCTGGCAGAA CGCCGCCGAC
GGCACGCCGC TGGTCAGACT GATCGAGCAG GCCGGCGGCA TTCCCGGCAT CAAGGTCGAC
GAAGGCACCC AGCAACTGCC GAATTGCCCC GGCGAACTGA TCACGATCGG CCTCGACAAG
CTGGCCGAGC GGCTGGCGAA GTATTACAAG CAGGGCGCCC GCTTCGCGAA ATGGCGCGCG
GTGATCGATA TCGGCGCCGG AATCCCGAGC TACACCGCGG TCCGCACCAA CGCCCACGCG
CTGGCGCGCT ATGCGGCGCT GTGCCAGCAG GCGCAGATCG TGCCGATCGT CGAGCCGGAA
GTGCTGATGG ACGGCGACCA CGACATCGAC CGCTGCACCG AGGTCACCGA ATTCGTGCTC
AAGGAAACCT TCCAGGAGCT GTATTACCAG AAGGTCGCGC TCGAAGGCAT GATCCTGAAA
CCGAACATGG CGGTCGCCGG CAAGAAGTCG GCCAACAAGG CCGGCGTGCA GGAAGTCGCG
GAGAAGACCG TCAAGCTGCT GAAGGCCTGC GTGCCCTCGG CGGTGCCGGG CATTGCGTTC
CTGTCGGGCG GCCAATCCGA CGAGGAGGCC ACCGCGCATC TCGACGCCAT GAACAAGATC
GGCGGCCTGC CCTGGGGCCT GACCTTCTCG TACGGCCGCG CTTTGCAGGC CGCGCCGCAG
AAGGCGTGGT CCGGCAAGGC CGAGAACATC GCGGCCGGCC AGGCCGCCTT CACCCACCGG
GCGCGGATGA ACTCGCTCGC CAGCAAGGGC GAGTGGACGG CCGCGCTCGA AAGCAAGAAA
GCCGCATAG
 
Protein sequence
MNLADLNKIA RAMVVPGKGI LAADESSGTI KKRFDVIGVE STETSRRDYR EMMFSSKQAM 
SEYISGVILY DETIWQNAAD GTPLVRLIEQ AGGIPGIKVD EGTQQLPNCP GELITIGLDK
LAERLAKYYK QGARFAKWRA VIDIGAGIPS YTAVRTNAHA LARYAALCQQ AQIVPIVEPE
VLMDGDHDID RCTEVTEFVL KETFQELYYQ KVALEGMILK PNMAVAGKKS ANKAGVQEVA
EKTVKLLKAC VPSAVPGIAF LSGGQSDEEA TAHLDAMNKI GGLPWGLTFS YGRALQAAPQ
KAWSGKAENI AAGQAAFTHR ARMNSLASKG EWTAALESKK AA