Gene RPD_4314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4314 
Symbolpgk 
ID4024838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4782051 
End bp4783247 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content67% 
IMG OID637964523 
Productphosphoglycerate kinase 
Protein accessionYP_571432 
Protein GI91978773 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.710301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT CATTCCGTAC CCTCGACGAC GTCGATGTCA AAGGCAAACG CGTGCTGCTG 
CGCGTCGATC TCAACGTGCC GATGGACGCC GGCAAGGTGA CCGACGCCAC GCGGCTCGAG
CGCGTCGTGC CGACCATCAC CGAGATCGCC GGCAAGGGCG GCAAAGTGAT CCTGCTGGCG
CATTTCGGCC GGCCGAAGGG CCGTGACGAG AAGAATTCGC TGAAGCCGGT CGCAGCCGCG
CTCGCCGACG TCATCAAGAA GCCGGTCGCT TTCGCCGAGG ACTGCATCGG CGAGCCCGCC
GCCAAGGCGA TCGCCGCGAT GCAGGACGGC GACGTGCTCT GCCTCGAGAA CACCCGCTTC
CACCCGGAAG AGGAAAAGAA CGATCCGGGC TTCGTGGCCA AGCTCGCCGA ACTCGGCGAC
ATCTGGGTCA ACGACGCCTT CTCGGCCGCG CATCGCGCCC ACGCCTCGAC CGAAGGCCTC
GGCCACAAGC TGCCGGCCTA TGCGGGCCGC ACCATGCAGG CCGAGATCGT CGCGCTGAAC
AAGGCGCTGG AAGCGCCCAC CAGACCGGTG ATCGCCATCG TCGGCGGCGC CAAGGTCTCG
AGCAAGATCG ACCTTCTGGA AAACCTCGTC ACCAAGGTGC AGGCGCTGGT GATCGGCGGC
GGCATGGCCA ACACCTTCCT GCACGCCCAG GGCGTCAAGG TCGGCAAGTC GCTGTGCGAG
AAGGATCTGG CGGAGACCGC GCTGCGGATT CTGAACAAGG CCGAGGCCGC CAATTGCGCC
ATCATCCTGC CGGTCGACGC CACCGTGGCC TATCATTTCG AGGCCAACGC GCCGTCCTTC
GCGTATGGGC TGGACGCGAT CCCGCCGGAC GCCATGATCC TCGACGTCGG CCCGCGCTCG
ATCGAGCGTA TCCACGCCGC GATCGACGAC GCGGCGACGC TGGTCTGGAA TGGCCCGGTC
GGCGCCTTCG AGCTGACGCC GTTCGACAAG GGGACGGTTG AAGCCGCCAA ACACGCGGCC
CGCCGCACCA AGGCCGGCAG CCTGGTCTCG GTCGCCGGCG GCGGCGACAC CGTCGCGGCG
CTGAACCACG CCGGCGTGGC CGACGATTTC ACCTATATCT CGACCGCCGG CGGCGCCTTC
CTCGAATGGA TGGAAGGCAA GCCGCTGCCG GGCGTCGAGG TGCTGCGGGT GAAGTGA
 
Protein sequence
MTKSFRTLDD VDVKGKRVLL RVDLNVPMDA GKVTDATRLE RVVPTITEIA GKGGKVILLA 
HFGRPKGRDE KNSLKPVAAA LADVIKKPVA FAEDCIGEPA AKAIAAMQDG DVLCLENTRF
HPEEEKNDPG FVAKLAELGD IWVNDAFSAA HRAHASTEGL GHKLPAYAGR TMQAEIVALN
KALEAPTRPV IAIVGGAKVS SKIDLLENLV TKVQALVIGG GMANTFLHAQ GVKVGKSLCE
KDLAETALRI LNKAEAANCA IILPVDATVA YHFEANAPSF AYGLDAIPPD AMILDVGPRS
IERIHAAIDD AATLVWNGPV GAFELTPFDK GTVEAAKHAA RRTKAGSLVS VAGGGDTVAA
LNHAGVADDF TYISTAGGAF LEWMEGKPLP GVEVLRVK