Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4314 |
Symbol | pgk |
ID | 4024838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4782051 |
End bp | 4783247 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637964523 |
Product | phosphoglycerate kinase |
Protein accession | YP_571432 |
Protein GI | 91978773 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.710301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAT CATTCCGTAC CCTCGACGAC GTCGATGTCA AAGGCAAACG CGTGCTGCTG CGCGTCGATC TCAACGTGCC GATGGACGCC GGCAAGGTGA CCGACGCCAC GCGGCTCGAG CGCGTCGTGC CGACCATCAC CGAGATCGCC GGCAAGGGCG GCAAAGTGAT CCTGCTGGCG CATTTCGGCC GGCCGAAGGG CCGTGACGAG AAGAATTCGC TGAAGCCGGT CGCAGCCGCG CTCGCCGACG TCATCAAGAA GCCGGTCGCT TTCGCCGAGG ACTGCATCGG CGAGCCCGCC GCCAAGGCGA TCGCCGCGAT GCAGGACGGC GACGTGCTCT GCCTCGAGAA CACCCGCTTC CACCCGGAAG AGGAAAAGAA CGATCCGGGC TTCGTGGCCA AGCTCGCCGA ACTCGGCGAC ATCTGGGTCA ACGACGCCTT CTCGGCCGCG CATCGCGCCC ACGCCTCGAC CGAAGGCCTC GGCCACAAGC TGCCGGCCTA TGCGGGCCGC ACCATGCAGG CCGAGATCGT CGCGCTGAAC AAGGCGCTGG AAGCGCCCAC CAGACCGGTG ATCGCCATCG TCGGCGGCGC CAAGGTCTCG AGCAAGATCG ACCTTCTGGA AAACCTCGTC ACCAAGGTGC AGGCGCTGGT GATCGGCGGC GGCATGGCCA ACACCTTCCT GCACGCCCAG GGCGTCAAGG TCGGCAAGTC GCTGTGCGAG AAGGATCTGG CGGAGACCGC GCTGCGGATT CTGAACAAGG CCGAGGCCGC CAATTGCGCC ATCATCCTGC CGGTCGACGC CACCGTGGCC TATCATTTCG AGGCCAACGC GCCGTCCTTC GCGTATGGGC TGGACGCGAT CCCGCCGGAC GCCATGATCC TCGACGTCGG CCCGCGCTCG ATCGAGCGTA TCCACGCCGC GATCGACGAC GCGGCGACGC TGGTCTGGAA TGGCCCGGTC GGCGCCTTCG AGCTGACGCC GTTCGACAAG GGGACGGTTG AAGCCGCCAA ACACGCGGCC CGCCGCACCA AGGCCGGCAG CCTGGTCTCG GTCGCCGGCG GCGGCGACAC CGTCGCGGCG CTGAACCACG CCGGCGTGGC CGACGATTTC ACCTATATCT CGACCGCCGG CGGCGCCTTC CTCGAATGGA TGGAAGGCAA GCCGCTGCCG GGCGTCGAGG TGCTGCGGGT GAAGTGA
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Protein sequence | MTKSFRTLDD VDVKGKRVLL RVDLNVPMDA GKVTDATRLE RVVPTITEIA GKGGKVILLA HFGRPKGRDE KNSLKPVAAA LADVIKKPVA FAEDCIGEPA AKAIAAMQDG DVLCLENTRF HPEEEKNDPG FVAKLAELGD IWVNDAFSAA HRAHASTEGL GHKLPAYAGR TMQAEIVALN KALEAPTRPV IAIVGGAKVS SKIDLLENLV TKVQALVIGG GMANTFLHAQ GVKVGKSLCE KDLAETALRI LNKAEAANCA IILPVDATVA YHFEANAPSF AYGLDAIPPD AMILDVGPRS IERIHAAIDD AATLVWNGPV GAFELTPFDK GTVEAAKHAA RRTKAGSLVS VAGGGDTVAA LNHAGVADDF TYISTAGGAF LEWMEGKPLP GVEVLRVK
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