Gene RPD_4285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4285 
Symbol 
ID4024807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4746543 
End bp4746989 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content62% 
IMG OID637964492 
Producthypothetical protein 
Protein accessionYP_571403 
Protein GI91978744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.702686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00862607 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAATG ACACTTATGC GCTGGCGGCG ACGGCGCAAC AGACATTCGC CGCTTGGCGT 
CGAGCTCTTC CTTCGGGAGA CGTGACGTTG CTGCGACCGC TGTTGGCCGA GAACGTGACG
TTTTATTCGC CGGTGATTCA ATCGCCGATC CAGGGCCGAG AGGCGGCGCT GCTGGTGCTG
ACCGCGGTCG CCGCCGTGCT CGAAAACCTG CGCTATCGCC GGACTTTCGT CGGTGGTCCG
CAAGACGCGG CGCTCGAGTT CAGCGCCCAG AACGGCAGAG TGCAGCTCAC TGGCATCGAT
CTGATCCGTT TCGACGCCGA GGGGCAGGTC GTTGAATTCG AGGTAATGAT GCGGCCGTTA
ATGGCACTTT CGGCGATCGC CGAACTCGTT GGGAGCCGCG TCGGGCTGCA GTTGCTCGAA
ATGAAGCTCA AATCCGACCC GGGCTAA
 
Protein sequence
MSNDTYALAA TAQQTFAAWR RALPSGDVTL LRPLLAENVT FYSPVIQSPI QGREAALLVL 
TAVAAVLENL RYRRTFVGGP QDAALEFSAQ NGRVQLTGID LIRFDAEGQV VEFEVMMRPL
MALSAIAELV GSRVGLQLLE MKLKSDPG