| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4277 |
|---|
| Symbol | |
|---|
| ID | 4024799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4740774 |
|---|
| End bp | 4741223 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637964484 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_571395 |
|---|
| Protein GI | 91978736 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0808908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACAGC CGCAAGCGGT GCTGTTCGCC TGCGGCATGA ACAGCGTACG CTCGCCGATG
GCCGAAGGGA TACTGCGACA GATCGCGCCG CGCACGATGT ATGTCCGCTC GGTCGGCGTG
AAGAAGCTCG AGCTCGATCC GTTCGCGGTG GCGGCGATGG CCGAAATGGG CCTCGACATT
TCGAAGCACA AGCCGATGAC TTTCGAGGAG CTTGACGACT ACGAGGGGCT GAACTTCGAC
CTGATCGTGA CGCTGTCGCC GGAGGCGCAT CACAAGGCGC TGGAGCTGAC CCGCACCAGC
GCGGTCGACG TCGAATACTG GCCGACCTTC GATCCGACCG GCATCGACGG CAATCGAGAG
CAGAAGCTCG CGGCCTATCG CGAACTCGGC GACTCCCTGA TGCAACGCAT CCTCAAGCGC
TTCAGCCGCC ACAGCGGCGG CAACGAGTAG
|
|---|
| Protein sequence | MGQPQAVLFA CGMNSVRSPM AEGILRQIAP RTMYVRSVGV KKLELDPFAV AAMAEMGLDI
SKHKPMTFEE LDDYEGLNFD LIVTLSPEAH HKALELTRTS AVDVEYWPTF DPTGIDGNRE
QKLAAYRELG DSLMQRILKR FSRHSGGNE
|
|---|
| |