| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4275 |
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| Symbol | |
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| ID | 4024796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4738251 |
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| End bp | 4738802 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637964481 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_571393 |
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| Protein GI | 91978734 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.047639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAGG ACGAGCTGAA GCCGCTGATG CTGGCAAGCC TGCGCGGCGA GGCCGCTGCG
CACCGCGAAC TGCTGTCGCG GCTGAGCGGC AATCTGCGCG TCTATTACCG GGGCAAGCTC
GCCAGAATCG GCCGCAGCGC GACAGAGGCC GAGGACCTTG TTCAAGAAGC CTTGATGGCC
ATTCACATGA GGCGCCACAC CTATGACCCG GCGCAGTTGC TGACGCCCTG GGTGCGCGCG
ATTGCGCGCT ACAAGCTGAT CGACCACCTG CGGCATACAC GGGGGGCGAT GTCTGACGTC
CGAATCGACG GCATCGATCC GTTGGTGGAG GAGGACGCCG CCGCCGGCGT CGAGAGTTCC
ATCGATCTCA GCAGGCTGAT GGCGGGACTT CCGGAGAAGA TGCGGACGGC TGTGCAGGCC
GTCAAGCTGG ACGGTCTGAG CGTCGCCGAG ACGGCGACTA AATTCAAGAT GAGCGAGTCT
TCAGTCAAAG TAAGCGTCCA TCGCGGTTTG AAGGCGTTGG CCGCGATGAT CGGACGGGAG
AAACTGTCAT GA
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| Protein sequence | MVEDELKPLM LASLRGEAAA HRELLSRLSG NLRVYYRGKL ARIGRSATEA EDLVQEALMA
IHMRRHTYDP AQLLTPWVRA IARYKLIDHL RHTRGAMSDV RIDGIDPLVE EDAAAGVESS
IDLSRLMAGL PEKMRTAVQA VKLDGLSVAE TATKFKMSES SVKVSVHRGL KALAAMIGRE
KLS
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