Gene RPD_4272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4272 
Symbol 
ID4024793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4736141 
End bp4737073 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID637964478 
Productcopper resistance D 
Protein accessionYP_571390 
Protein GI91978731 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1276] Putative copper export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0975994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT TCGGGCTCGT CATCGCCCGT TTCATCCACT ACGCGGCGTC CGCCACGCTC 
GCCGGAATCG CGTTCTTTCC GATCTATGCT TGTGCCGGAG GCGAGCCCCC GGAGCTCGCC
CGCTGGAGAA ACAGGCTGAT GGTCTGGTCG GCGATCCTCG CTCTGATCAG CGGCCTCGGC
TGGTTCGCCT TCACTGCGGC CAATATGAGC GGCGGGCTGG CGGACGTCGC GGATTTGGAA
GTCATCGCGT CAGTCATTCG CGACACCGGC TTCGGCGGTG TCTGGGCGGT GCGCATGGTC
GTCGCGACCG GACTGGTCGC CATTCTCCTG CAGCGCTCGT CGCGGGCGGG CGCCGACCGG
GATGTGGTGA CGTTGTTGCT CGCCGCCGGA CTCCTCGCCT CCCTCGCGGG CGCCGGTCAC
AGCCAGATGG CGGAGGGCTG GGCGAGCGCG CTGCATGTCA CTGCGGACGC GGCGCATCTT
CTCGCGGCGG GAGCCTGGCT CGGTGGACTG GCTCCGCTCG GCTTCATCCT GCTGCGCGGC
GCGGCGACGC CGGCGAGACC AACCTCCATC GACGTCGATC GCATGCTGAT GCGTTTTTCC
GGAATGGGAT ACGTTGCCGT GGCGACGCTG GTAGGAACCG GCTTGGTGAA TAGCTGGTTC
CTCGTCGGAT CGGTCTCCAG CCTGCTTCAC AGCACCTACG GGCAGATCCT GATGGCGAAG
CTGGCACTCT TCGCAAGTAT GCTCGCGCTC GCTGCGGCGA ACAGACTCTG GTTGATGCCG
GCGCTGGAAG CGTCGCGAAG GCGCGACTTG GACGGATCCG ACCTCTGGCG GCGCAGACTT
CGAACCCATG TGCTGGGCGA GCAAAGTCTG GGCCTGCTGG TCCTGCTGAG CGTGAGCGTC
CTGGGAACGA TACGACCCGC GATCGGACAA TGA
 
Protein sequence
MIDFGLVIAR FIHYAASATL AGIAFFPIYA CAGGEPPELA RWRNRLMVWS AILALISGLG 
WFAFTAANMS GGLADVADLE VIASVIRDTG FGGVWAVRMV VATGLVAILL QRSSRAGADR
DVVTLLLAAG LLASLAGAGH SQMAEGWASA LHVTADAAHL LAAGAWLGGL APLGFILLRG
AATPARPTSI DVDRMLMRFS GMGYVAVATL VGTGLVNSWF LVGSVSSLLH STYGQILMAK
LALFASMLAL AAANRLWLMP ALEASRRRDL DGSDLWRRRL RTHVLGEQSL GLLVLLSVSV
LGTIRPAIGQ