Gene RPD_4261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4261 
Symbol 
ID4024782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4728218 
End bp4728649 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID637964467 
Producthypothetical protein 
Protein accessionYP_571379 
Protein GI91978720 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2143] Thioredoxin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.215632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.396245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCATA GCATGGCCCG AAAGCTCCTG AAATCGATGC TGCTCTGCGG AATCCTGTTG 
GCGGCGGCGT TTGCGCCTGC GGCCGCAAGG GCTGCGGAAT TGTTGATGTT CGAACGTGAC
GGCTGCGTCT GGTGCGCCCG CTGGGACCGC GAGATCGGCC CGATCTACCC GAAGACCGAC
GAAGCCAGAT TGCTGCCGCT GCGACGCATC AACATCGACC GCGACAAAGC TGCGGATCTT
GGGTTAGCTT CGCCGGTGCG ATTTACGCCG ACCTTCGTGG TGATCGACAA AGGCCGCGAG
GTCGGCCGCA TCACCGGGTA CATCAACGAC GACGCGTTCT GGGGGTTGCT CGGCACCTTG
GTCGCGAAGA TCGCGCCGTC GCCTCACCCC AACCACACTG AACGCGGATT AGCGCAACGC
AAGGCCAGTT GA
 
Protein sequence
MYHSMARKLL KSMLLCGILL AAAFAPAAAR AAELLMFERD GCVWCARWDR EIGPIYPKTD 
EARLLPLRRI NIDRDKAADL GLASPVRFTP TFVVIDKGRE VGRITGYIND DAFWGLLGTL
VAKIAPSPHP NHTERGLAQR KAS