Gene RPD_4258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4258 
Symbol 
ID4024779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4726175 
End bp4726681 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content68% 
IMG OID637964464 
Producthypothetical protein 
Protein accessionYP_571376 
Protein GI91978717 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.403324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA AATGGATAGC GGCGATCGCG ATGACCTTCG GCGCGGCGAT CGGCACGATT 
CCGGCCGGCG CGCAGGACGC GCTGGTCGTC ACCAAATCGC TGAACCCGGA GCTGGCGCTC
GAATGCGCCA GGGCCGCGAT CGCCGAGTGC CGCAAGCAGG GCTTTCAGGT CGCGGTCGCG
GTGGTCGATC GCACCGGACT GCCGCAGGTG ATGTTGCGCG ACCGCTTCGC CGGCGCGCAT
ACGCCGACCA CCGCGACCGG CAAGGCCTGG ACCGCGGTGT CGTTCAGGAC GCCCACGACC
GAACTGCAGA ACATCACCAA GCCCGGGATG CCACAGTCCG GATTGCGCGA TCTGCCGAAT
GTGGTGATGC TGGGCGGCGG CATGATGATC GAGGCCGGCG GCTCTGTGGT CGGCGGCATC
GGCGTGTCGG GCGCCCCCGG CGGCGATGCC GATGACGCCT GCGCCAAGGC CGGCATCGAC
GCCATCCGCG ACAAGCTGGA TTTCTGA
 
Protein sequence
MNRKWIAAIA MTFGAAIGTI PAGAQDALVV TKSLNPELAL ECARAAIAEC RKQGFQVAVA 
VVDRTGLPQV MLRDRFAGAH TPTTATGKAW TAVSFRTPTT ELQNITKPGM PQSGLRDLPN
VVMLGGGMMI EAGGSVVGGI GVSGAPGGDA DDACAKAGID AIRDKLDF