Gene RPD_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4216 
Symbol 
ID4024737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4682317 
End bp4683726 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content68% 
IMG OID637964422 
Producthypothetical protein 
Protein accessionYP_571334 
Protein GI91978675 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.332762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.739533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTAT GGGGACTGGT TTTGGCTCCG TTCCGCGCCA TCTTCACTCT GCCTGCCGCG 
AAGGAAGCCC CCGTGCCGCA TCGGAAGATC GAGAGGACCG CCTTCGAGAG GAGAGCGTTG
GCCGTGCCGA GTTCGCGGCT GTCGCGGCTG GCGAAATTGG GCGGACTGGC CTCGTCGATC
GCGGGCAATG TCGCCGCCGA GGTGGCGGGG CAGCTCGCGC GCGGCCAGCG CCCGCGGATC
GAAGATCTGC TGCTCACGCC CGCCAACGCC ATCAAGGTCG CCGACAGGCT GGCGCAGATG
CGCGGCGCGG CAATGAAGGT CGGCCAGCTG ATCTCGATGG ATGCCGGCGA CATGCTGCCG
CCTGAACTGG CCGAAATCCT CGGCCGTCTG CGCTCGGAAG CGCATCACAT GCCGGTCGCG
CAGTTGCGAC GGGTGCTGAC CGAGGCCTGG GGGCCGCATT GGCAGCGCCG GTTCGAGGTG
TTCGACGCCC ACCCCGTCGC CGCGGCCTCG ATCGGCCAGG TCCACCGGGT GCGGACCACA
GACGGCCGCG ATCTGGCGAT CAAGCTGCAA TACCCCGGCG TCCGCCGCAG CATCGATTCC
GACGTCAACA ACGTCGCCTC GCTGATGCGC ATGGCCGGGC TGGTGCCCAG GGGCGTCGAC
GTTGCGCCGA TGATCGCCGA GGCCAAGCGG CAGTTGCACG AGGAGGCCGA CTACGAACGG
GAAGGCCGCT GTCTGTCGCA ATTCGGCGCG CTGCTCGCCG ACCGGCCCGA ATTCCGCGTG
CCCGAGTTGC ACGCCGACCT GACGACGCCG AACGTGCTGG CGATGAGTTA CGTCGAGGGC
GGACCGATTG ACAGCCTCGC CGACGCGCCG CAGGCGGAGC GCGACCGGGT GATGACGCTG
ATGATCGGCC TCATTTTCCG CGAGCTGTTC GAATTCCGCC TGATGCAGAC CGATCCGAAC
TTCGCCAATT ATCGTTATGT GCCGGCGACC GGGCAGGTGA TGCTGCTCGA CTTCGGCGCC
ACCCGCGCCT TTCCGGCTGA TTTCGCCGAG CTCTACCGGC GGCTGTTGCG CGCAGGACTG
GCCGGCGACC GTCCGGGCGT TCGCGCCGCC GCGCGCGAGA TCGGTTTCCT GGCCGGCAAC
ACGCCTGCCC GGCTGGAACA GGCGATGCTC GAGATCTTCG AGATGTCGCT GCAACCGCTG
CGGCAGGATG GGCCGTTCGA TTTCGGCGCC AGCGACCTCG CGATCCGGAT GCGCGAAGCC
GGCATGGCGA TGGCCGCAGA CCACGCGCAT TTCCGGATTC CGCCGATGGA CACGTTGTTC
CTGCAGCGCA AGTTCGGCGG CATCTACATG CTGGCGACGC GGATGCGGGC GCGGGTCGAT
CTGCGCGCCC TCGTCGAGCC GCATCTGTGA
 
Protein sequence
MRLWGLVLAP FRAIFTLPAA KEAPVPHRKI ERTAFERRAL AVPSSRLSRL AKLGGLASSI 
AGNVAAEVAG QLARGQRPRI EDLLLTPANA IKVADRLAQM RGAAMKVGQL ISMDAGDMLP
PELAEILGRL RSEAHHMPVA QLRRVLTEAW GPHWQRRFEV FDAHPVAAAS IGQVHRVRTT
DGRDLAIKLQ YPGVRRSIDS DVNNVASLMR MAGLVPRGVD VAPMIAEAKR QLHEEADYER
EGRCLSQFGA LLADRPEFRV PELHADLTTP NVLAMSYVEG GPIDSLADAP QAERDRVMTL
MIGLIFRELF EFRLMQTDPN FANYRYVPAT GQVMLLDFGA TRAFPADFAE LYRRLLRAGL
AGDRPGVRAA AREIGFLAGN TPARLEQAML EIFEMSLQPL RQDGPFDFGA SDLAIRMREA
GMAMAADHAH FRIPPMDTLF LQRKFGGIYM LATRMRARVD LRALVEPHL