Gene RPD_4210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4210 
Symbol 
ID4024731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4676457 
End bp4677230 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID637964416 
Producthypothetical protein 
Protein accessionYP_571328 
Protein GI91978669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC CAGCAGTCAT CGTCGTAGGC GCAGACAAGG GCGGCGTGGG CAAGACCACG 
GTCTCGCGAA CCTTGCTGGA CTATTTCAAC GCCAACAACA TCCCGACCCG CGCCTTCGAC
ACCGAGTCGC CGCGCGGCAC CCTGAAGCGC TTCCATCCGG GCATCACCGA AATCGTCGAC
ATGACGACGA CGGCGGACCA GATGAAGATC TTCGATACGC TGAACACGGC GGCGCCGTCG
GTGACCGTGA TCGACGTCCG CGCCGGCCTG CTGTCGCCGG CGCTCGCGAG CTTGCGCGAC
ATCGGCTTCC TCGACGCCGC GCGCTCCGGC CAGATCACCT TCGCGGTGTT CCATATTCTC
GGCCCTTCGA TCGCCTCGCT CGACGAGATC GCCGAGACCG CCAATTTCAT GATCGGCGCG
AAGTATTTCC TGGTGAAGAA CTTCATCAAC AACACCAGCT TCTTCGAGTG GGATCAGGCG
ACCTACAATT CGTACTTCCA TCGCATCAAG GACGCGACCG AGCTGACGAT CCCCAAGCTC
AACGAAATGG CCTATGAGCA GGTCGAGGTG TCGTCGGTGC CGTTTCTCAA ATTCGTCGCC
AACAAGGGCG TCCAGGACGA GCCGGCGAAC TACTCCTTCG TGCTGCGCGG CTATGTCCGG
CACTGGCTCG CCAATGTGTG GAGCGAGTTC GACCGGATCA AGCTCACCGA CCTCGTCGGC
AAGGACAAGG GCGGCCGCAG CACCAATGTG GCGGAAGCCG ACAGCGAGAA ATAA
 
Protein sequence
MAKPAVIVVG ADKGGVGKTT VSRTLLDYFN ANNIPTRAFD TESPRGTLKR FHPGITEIVD 
MTTTADQMKI FDTLNTAAPS VTVIDVRAGL LSPALASLRD IGFLDAARSG QITFAVFHIL
GPSIASLDEI AETANFMIGA KYFLVKNFIN NTSFFEWDQA TYNSYFHRIK DATELTIPKL
NEMAYEQVEV SSVPFLKFVA NKGVQDEPAN YSFVLRGYVR HWLANVWSEF DRIKLTDLVG
KDKGGRSTNV AEADSEK