Gene RPD_4196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4196 
Symbol 
ID4024717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4663103 
End bp4663984 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID637964402 
Producthypothetical protein 
Protein accessionYP_571314 
Protein GI91978655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTT TCTTGTTCGC CGGCCTGGTC ATCGTCTTCA GCATGATCTG GAGTTCCGCC 
TTTGTCGCCG GAGCGGTTGC ATTGCGCGAT TTCGATCCCA CCACGCTGCT GACGATTCGC
TTCGCCGCGA GCGCGCTGCT GCTGTTGCCG CTCTGCCTGT TGACTTCAGC GCCCACCTTC
ACCGCCGATG TCGTCGGTCA CGGCCTCGGC CTCGGGGTGT TGAACAATGC GATCTATCTC
GGCCTGAGCT TTGCCGCGCT GCGGACGGTC CGTCCTGAGG TGGTGATCGT CGTGGTGAGC
TGCGCGCCGT TCGTCACCAC ATTGTTGTCG GCTGCGTTCG GCCTCGAGCG CATCCGGGCG
ATGTCGGTTG CGGGCGCCGT GCTTGCCTTC GCCGGCGTGG TGATGGTCTC GGGGGTGGTA
GGCGCCGACG TGCCGGACCT CGGCGGTCTG TCGCTGGCCA TCGGCGGAAT GATCGCGTTC
GCGGCGGCGA CCGTGTTGTT CCGCAAGTCG GCGGGCCGGT TGCCGCTGTT GCAGGTGAAT
TTCTGGCAGT CGGTGGCAGG CGCGGTGGTG CTGCTTCCGG TCGCGCTGTT GTGGGGCCAG
CCGATCGGGT CGCCATCGCC GTCGTCGTTG CTGGCCCTCG CTCATTTGGT CGTCGTCGTC
ACCATCGGCG GCATGGCGCT GTGGTTGCTG CTGATCCGCA AGAGCGGCGC CGCGACAGCG
TCGACCTATC ACCTGCTCAA TCCGTTCAGC GGCGCGCTGC TCGCCCATCT CGTGCTCGGC
GCGCCGTTGC GCGCCACTGA TTTCGCCGGG GCGACCTTGA TCGCCATCGG CCTGGTCGTC
GCCAATCAAC AACAACTTTT CAGTCGTAAG GTCGGAGGTT AG
 
Protein sequence
MPRFLFAGLV IVFSMIWSSA FVAGAVALRD FDPTTLLTIR FAASALLLLP LCLLTSAPTF 
TADVVGHGLG LGVLNNAIYL GLSFAALRTV RPEVVIVVVS CAPFVTTLLS AAFGLERIRA
MSVAGAVLAF AGVVMVSGVV GADVPDLGGL SLAIGGMIAF AAATVLFRKS AGRLPLLQVN
FWQSVAGAVV LLPVALLWGQ PIGSPSPSSL LALAHLVVVV TIGGMALWLL LIRKSGAATA
STYHLLNPFS GALLAHLVLG APLRATDFAG ATLIAIGLVV ANQQQLFSRK VGG