| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4163 |
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| Symbol | |
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| ID | 4024685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4630460 |
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| End bp | 4631716 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964371 |
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| Product | putative OpgC protein, require for succinylation of osmoregulated periplasmic glucans |
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| Protein accession | YP_571283 |
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| Protein GI | 91978624 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4645] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.334598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGCAA GCAACGAAAC GCCGCGTAAC GTGGCGATGA TCGGCCCCGC CGAGCGCGAT
CTGCGGCTGG ATTTTCTGCG CGGCGTCGGC CAGTGGATGA TCTTCATCGA TCACATCCCG
TACAATGTTC TGCACTGGTT CACGCTGCGC AATTACGGCT TCTGCGACGC CGCGGAGTTC
TTCGTCTACA TTTCAGGCTA TTCGATCGGC TTCGCCTATG GCCCGGCGAT CAGGCGCGGC
GAGATGGTCG CCGCGATCAA GCGGCTGTGG ACGCGCGCGG TGCAACTCTA CGTCGCGCAC
ATCTTCCTGT TCCTGTTCTT CACCGCGCAG ATTGCGCGCG CCGCGCGGCG CTTCGACAAT
CCGATGTACA AGGACGAGTT CAACGTCGCG CAGTTTCTCG AGAATCCCGA CATCATGATC
CAGCAGGCGC TGCTGCTGAA ATACAAGCCG GTCAATCTCG ACGTACTGCC GCTCTACATC
GTGCTGGTGG TCGCCGCGCC GCTGATCCTG TGGGGCCTGC TGCGCCGTCC CACCTGGGTT
CTGGTCGGCT CCGGACTGCT GTATGTGGTG TCGCGGCATT TCGGCTGGAA CTTTCCGTCT
TTCCCCGACG GTCATTGGTA CTTCAACCCG TTCGCGTGGC AATTCCTGTT CGTGTTCGGA
ATCTGGTGCG GCTTCGGCAA CGGTCCGCAG ATCAGGCCGT GGGTGCGCTC GCTGCCGAAC
CAGATCGTGT CCTGGACGAT CGTGCTGGTC GCGCTGGTGA TCGTGATGTC CTGGAATTTC
GAGCCGCTCT ACGGCCTCGT TCCGGAATCG ATCGGCAAGC TGCTGTACCC GATCGACAAG
ACCAGCCTGG CGCCGGTCCG GCTGATCCAC TTCCTGGCGC TGCTCGCGAT CGTGGTGCGG
CTGCTGCCGC CCGAACTGCC GGCGCTGCGC TCGCCGCATC TGCGGCCGAT CATCCTGTGC
GGCCAGCGTT CGCTGCCGGT GTTTTGCTTC GGCGTGATCC TGTCATTCAC CGCGCACTGG
ATTCTGGTGC AGGTCTCGGG CGGCATCGCC ATGCAGATCC TCGTCAGCAT CGGCGGCATC
GGCCTGCTGA CCGGCATCGC CTGGCTCGCG ACCTGGTATC GCAGCCTGCC GACGCTGTTC
ACGGTGCCGG TGACGATGCC TGTCGTCGAG CAGGAGAAAC CCGGCGAGGC GAAGACGGAT
GCTGCCGCGC CCGGCGAAGG CGCTGCGGCC CAAAGTCGTC AGCCGGGTCA GCTTTGA
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| Protein sequence | MDASNETPRN VAMIGPAERD LRLDFLRGVG QWMIFIDHIP YNVLHWFTLR NYGFCDAAEF
FVYISGYSIG FAYGPAIRRG EMVAAIKRLW TRAVQLYVAH IFLFLFFTAQ IARAARRFDN
PMYKDEFNVA QFLENPDIMI QQALLLKYKP VNLDVLPLYI VLVVAAPLIL WGLLRRPTWV
LVGSGLLYVV SRHFGWNFPS FPDGHWYFNP FAWQFLFVFG IWCGFGNGPQ IRPWVRSLPN
QIVSWTIVLV ALVIVMSWNF EPLYGLVPES IGKLLYPIDK TSLAPVRLIH FLALLAIVVR
LLPPELPALR SPHLRPIILC GQRSLPVFCF GVILSFTAHW ILVQVSGGIA MQILVSIGGI
GLLTGIAWLA TWYRSLPTLF TVPVTMPVVE QEKPGEAKTD AAAPGEGAAA QSRQPGQL
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