Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4142 |
Symbol | |
ID | 4024664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4611860 |
End bp | 4612903 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637964350 |
Product | tRNA(Ile)-lysidine synthetase-like |
Protein accession | YP_571262 |
Protein GI | 91978603 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGAA GTGACGAGGC GCCGATTTCG GCGCGTGAGG CCAGCCACCT GTTCGCCGAC TGGAAGGCGG TCCCCGCGAT CGTGCTCGCG GTGTCCGGCG GCCCGGACTC TCTCGCGCTG CTGTGGCTTG CAGCGCGTTG GCGCAAGGCG CTGAAGCGAG GGCCGGCGCT CGGCGTCGTC ACTGTCGATC ATGGCCTGAG GCCGGAAGCA GCCCGCGAAG CGCGTGCCGT CAAGCAGCTT GCGCGCACGC TCGATCTGCC GCACCGGACG CTGCGCTGGA CCGGGGAGAA GCCGACAACG GGATTGCCCG CGGCGGCCCG CGCGGCGCGA TACCGGTTGC TGGCGAAGGC GGCGAAAAGA TTCGGCGCGA CCCACATCAT GACGGCGCAT ACCCGGGATG ATCAGGCCGA GACCGTGTTG ATGCGGCTGT CGCGCGGCAG CGGCATCGCC GGCCTCGCCG CGATGGCGCG CGAGACCGAG CGCGACGGCG CGGTGCTGGT CCGTCCGTTG CTCGACGTTT CCAAACAGCG GCTGATCGCG ACGCTGAGCA AGGCGCAGAT CGAATACACG ACCGACCCCA GCAATCTCGA CCCGCGCTTC ACCCGCCCGC GTTGGCGTGA ATTGATGCCG CGTCTCGCCG CGGAAGGCTG CGATTCGCGA AACCTGGCCC GGTTTGCCGC CCGGGTGGCG CGTGCCGATG CCGCGCTCGA ACTGCTGGTC GACGGCGCCG AGCGGTTTCT GGCGCTACGC GGCGGCGGCA GTCATCCGGG GCGCGGCTAT GACGCCCCGG CATTTTCCGC ATTGGCAGCG GAAATCCGGA TTCGCTTGTT GCTGCGAACT CTCGCCCGGG TCGGCGGCGA GGGGCGCCCG GAACTCGGTA AGGTGGAAAT GCTCGCTGCT GCGCTTGAAG GCGCTGCAGC GAAACCTGCG CCCGAACGGG GGCAAATCAA GTTGAAACAG ACGCTTGCGG GCGCCGTCAT CACTTTGACG CCTGCCCGGT TGCTGATCGT CCCGGCGCCG CCGCGCCGCC GCAAGAGCGG CTAG
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Protein sequence | MSGSDEAPIS AREASHLFAD WKAVPAIVLA VSGGPDSLAL LWLAARWRKA LKRGPALGVV TVDHGLRPEA AREARAVKQL ARTLDLPHRT LRWTGEKPTT GLPAAARAAR YRLLAKAAKR FGATHIMTAH TRDDQAETVL MRLSRGSGIA GLAAMARETE RDGAVLVRPL LDVSKQRLIA TLSKAQIEYT TDPSNLDPRF TRPRWRELMP RLAAEGCDSR NLARFAARVA RADAALELLV DGAERFLALR GGGSHPGRGY DAPAFSALAA EIRIRLLLRT LARVGGEGRP ELGKVEMLAA ALEGAAAKPA PERGQIKLKQ TLAGAVITLT PARLLIVPAP PRRRKSG
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