Gene RPD_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4123 
Symbol 
ID4024645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4588139 
End bp4588912 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID637964331 
Producthypothetical protein 
Protein accessionYP_571243 
Protein GI91978584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.40781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCTC AACGCAAGCG CTTCCGGATC GAAGAATTCA CGCTCGGTAG CGCGCCCCCG 
CTAGTACCGA TCGACACAGA AGCGGGTCCG ACCCACCACG ATCTCATGTC GGAGCTTCGT
GCGATCCGAA CCCAGATCGT GGGTGGAGGT CATGCGACGG GCGTCGGCAA CAAGGAGATC
GACGCCTCGG TCGCCAACGA GGTCGCGGAA GCGCGGGCGC TGCTGGCGAC CTATCGGGCT
CAGATCGAAC AATGCGAGAA GCTCAAGATC GAGCTCGACC TGATCCATAA CGCGATCGAC
CAGACCAAAC GCGAAATCGC GGTGCTGCAC ACCAAGAGCT TCAACGGCGA GGAGATGGCC
AAGGTCAACG GCGAACTCGG CGCCGTCGTC GGCGGCACCG AGGAAGCCAC GCAGCAGATC
CTCGAAGCCG CGGAGGCGAT CGACCAGGCC GCCACCGCGC TGGGCAAGGT GACTTCGGTC
GACCAGCAGA AGGCGCTGAG CGAGGAAATC CAGGAGCGCG TGATCGCGAT CTTCGAGGCC
TGCAACTTCC AGGACCTCAC CGGCCAGCGC ATCAGCAAGG TGATGACCAC GATGAAGTTC
ATCGAGCACC ACATCGTGGT GATGATGGAC ATCTGGGGCG GCGTCGACGC CATCAAGGCG
CATGTTCCGT CGGTCGTCGA CACCCGCGAA GGCGACGCCA AGCTGCTGAA TGGACCGAAA
CTCGACGACG ACGGACACGC CTCGCAGGAC GACATCGACG CGATGTTCAA CTGA
 
Protein sequence
MSPQRKRFRI EEFTLGSAPP LVPIDTEAGP THHDLMSELR AIRTQIVGGG HATGVGNKEI 
DASVANEVAE ARALLATYRA QIEQCEKLKI ELDLIHNAID QTKREIAVLH TKSFNGEEMA
KVNGELGAVV GGTEEATQQI LEAAEAIDQA ATALGKVTSV DQQKALSEEI QERVIAIFEA
CNFQDLTGQR ISKVMTTMKF IEHHIVVMMD IWGGVDAIKA HVPSVVDTRE GDAKLLNGPK
LDDDGHASQD DIDAMFN