Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4113 |
Symbol | |
ID | 4024635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4577886 |
End bp | 4578641 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637964321 |
Product | hypothetical protein |
Protein accession | YP_571233 |
Protein GI | 91978574 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.425718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCCTGT TCGACGCGGA CTTCAAGCAC TTTGCGCGAC GCAGGAACAA ATCATTGTCG GGGTTTGTGC AAGCTTCCGT CAATCATGCT GGCCAAGCTT CTGTCAATCA TGCGCGCCGA TGCAGCCCGC GCAAGTTTCG ATTAACCAGC CTTTTTAAGC GATTCCGGAC ACGGCTCTGG CAAGCTTCAC CCATCGACCG GACACATAAC TCCGGCGGGG AGAACAAAGC CGTGAGGCGT CAAACAGCAA CAGGCGGGCG TAATCCCGCC GGGTCGAGCC GCGCTCTGCG GCTCGACCCT CTCTCACTGC CGATCCGCTA CGATGCGCAC GATACGCGTG CCGACGGCGG CGTCCGGCAA ATCGAATTGC ATCGCGAACG CGTGATCCTG CACCGCGCCG TGGCCGGGAT GCGGATGGCG ATCAAGGTGC GCGTCAGCGA CTTCCGCGGC GTCGGTTGCC GCGGGCTCGA CGATGGCCGG ATGCTGATGC TGGTGCATCG CGATCCGTCG CTGTCGGTGC CGCTGTGTAT CAGCAGCGAC AACGACGAGA TCGAACGCGC CTGGGCGCTG TGGAGCGAAA TCTTCGCACT GCCGCAATTG CCCGACGACA CCCCGCGCGA GGCCGCGCAA CGCCGCCGCC GCCACAGCGT GATGAGCCGC CGCCGCCCCC GTTTTCTGAT GCGTCGACGT ACCGGCGCGC TGCTCAATGC GCCGCGCAGC TACGCGGGCG AGCGCGAGAT CATCGCCCGG CATTGA
|
Protein sequence | MCLFDADFKH FARRRNKSLS GFVQASVNHA GQASVNHARR CSPRKFRLTS LFKRFRTRLW QASPIDRTHN SGGENKAVRR QTATGGRNPA GSSRALRLDP LSLPIRYDAH DTRADGGVRQ IELHRERVIL HRAVAGMRMA IKVRVSDFRG VGCRGLDDGR MLMLVHRDPS LSVPLCISSD NDEIERAWAL WSEIFALPQL PDDTPREAAQ RRRRHSVMSR RRPRFLMRRR TGALLNAPRS YAGEREIIAR H
|
| |