Gene RPD_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4088 
Symbol 
ID4024605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4543323 
End bp4544432 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content69% 
IMG OID637964291 
Productglycosyl transferase, group 1 
Protein accessionYP_571208 
Protein GI91978549 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCA TGCTGGCGAT CTTCAAGCTC GACAAGCTCG GCGGCAAGGA ACGCGATTGC 
ATTGCGATCG CGCGGCATCT TGCGGCGCGC GGTCACGACG TCACCGTGCT CACGACGTCG
GCCGATGTGC CGGGGATCGA CGATCTGAAA CTGGTGACGC TGCGCGTCCG CGGACTCGCC
AATCACGCGC TGCTGCGCGA TTTCGCCCGC GGGGTGATCG AGCGCAAGCT GCGCGCCGAG
CCCGATGCCT TGCTGTCGTT CGAGCGGATT CCGGACGCCG ATTTTCACTA TGCCGCCGAC
GGCGCCGCGA TCCTGCGCGA ATGGCGGCTG TGGTCCTGGC CGCCGCGGCG TCGCACGCGG
CTGGCGCTGG AGCGCGCCGT GTTCGCATCG CCGGCCGCGA CCAGGCTGTT CTTCATGACC
GAGCGGCAGC GCGACGAATA CATCATCGCC TATGATTTCG AGCCGTCCCG CGCCACCGTG
CTGCCGATGA TCCTGCATGA CGACCGCTAC GCGGCGGCGC GCAAGCTCGG CGCCGGCGAT
TCGCGCAAGG ATCGAGGGCG CAAGGATCTC GGCGTCGCCG CCGACGAACT GCTCGCGGTG
TCGGTCGCGG TCGATCCGAA GCTGAAAGGC GTCGATCGCA GCCTCGCGGC GCTGACGCTG
TATCCCAAGC TGCATCTCGT CATTGCCGGA TCGGATGCGC CGTGGCTGCA TCGCCGCGTC
GTGCGGCTCG ATCTCGAGAG CCGGGTTCAC ATCGTCCCCT ACGTCGCCGA GGTCATGGAC
CTGATCGCGA CCGCCGATTT CATGCTGCAC CCCGCGCGCT CCGAAGCGGC CGGGCAGGTG
ATCGGCGAGG CGCTGCTCGC CGGCGTGCCG GTGCTCGCCT CGGCGGCCTG CGGCTATGCG
GACGAAATCG CGCGCAGCGG CGCCGGAATG GTGCTGCCCG ATCCGTTCCA GCAGGATGCA
CTGGTCAATG GCATTGCCCA TATGATCGAC GCGCTGCCGG CGATGCGCAA GGCCGCGGCG
GTGCGGGCGC GCAGTCTGCA GCAGCAGCGC GGCGCCTGGC TGTCGGTGAT CGCGGAGCGG
ATCGAGCGCG GCGCTGCAAA GCCTCGCTGA
 
Protein sequence
MKVMLAIFKL DKLGGKERDC IAIARHLAAR GHDVTVLTTS ADVPGIDDLK LVTLRVRGLA 
NHALLRDFAR GVIERKLRAE PDALLSFERI PDADFHYAAD GAAILREWRL WSWPPRRRTR
LALERAVFAS PAATRLFFMT ERQRDEYIIA YDFEPSRATV LPMILHDDRY AAARKLGAGD
SRKDRGRKDL GVAADELLAV SVAVDPKLKG VDRSLAALTL YPKLHLVIAG SDAPWLHRRV
VRLDLESRVH IVPYVAEVMD LIATADFMLH PARSEAAGQV IGEALLAGVP VLASAACGYA
DEIARSGAGM VLPDPFQQDA LVNGIAHMID ALPAMRKAAA VRARSLQQQR GAWLSVIAER
IERGAAKPR