| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4070 |
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| Symbol | |
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| ID | 4024587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4523269 |
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| End bp | 4524069 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964273 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_571190 |
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| Protein GI | 91978531 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACTC TGAGCCATCG CCAGTCCGAA ATTCTCAACC TCGCCCGCGC CTCCGGTCGG
GTGATGGTGG ATGATCTCGC CCGCCGCTTC GAAGTCTCGG CGCAGACCAT CCGTAAGGAT
CTCAACGATC TGTGCGATCA GCGCTCGCTG ACGCGAATCC ACGGCGGGGC GATCGTCGCC
TCCGGCGTCG AGAACCTTGC ATATGAGGCG CGTCGCTTCG TCGCTGCCGA GGAAAAACGG
GCGATCGGGG CCGCCGCGGC GGCGCAGATC CCGAACGGCT GCTCGCTGTT CATCAACATC
GGCACCACGA CCGAGGAGGT CGCGAACGCG CTGACCTCGC ACGAGGAACT GCTGGTGATT
ACCAACAACC TCAACGTCGC GATGCTGTTG TACAAATATC CGCGGATCGA GGTGATCGTC
GCCGGCGGCA CGGTGCGCCG CGCCGATGGT GCGGTGATCG GCTCGGCGGC GATCAGCCTG
ATTGGCCAGT TCAAGGTCGA CTATGCGATC ATCGGCGCCT CGGCGATCGA CGAGGAGGGC
GCCTTGCTCG ACTTCGACTA CAGCGAGGTG CAGGCGTCCC AGGCGATCAT CGCCAACGCC
CGCAGCGTGA TGCTGGTGGC CGACTCGACC AAGCTGCGGC GGAGCGCACC GGTGCGGATT
GCGCATCTCA GCCAGATCCA GACGTTCGTC ACCGACGAGG CGCTGCCTCC GGCGCTGCAG
AGCATCTGCG ACGCGCGCGG AATCCAGGTG ATCGAGGCGG CCCCGAAACG CGCCGACAGC
TTCGACGAAA GTGCAGCGTA G
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| Protein sequence | MTTLSHRQSE ILNLARASGR VMVDDLARRF EVSAQTIRKD LNDLCDQRSL TRIHGGAIVA
SGVENLAYEA RRFVAAEEKR AIGAAAAAQI PNGCSLFINI GTTTEEVANA LTSHEELLVI
TNNLNVAMLL YKYPRIEVIV AGGTVRRADG AVIGSAAISL IGQFKVDYAI IGASAIDEEG
ALLDFDYSEV QASQAIIANA RSVMLVADST KLRRSAPVRI AHLSQIQTFV TDEALPPALQ
SICDARGIQV IEAAPKRADS FDESAA
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