| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4054 |
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| Symbol | |
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| ID | 4024571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4504908 |
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| End bp | 4506350 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964257 |
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| Product | hypothetical protein |
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| Protein accession | YP_571174 |
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| Protein GI | 91978515 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.568607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0971132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGTG AATCCGGGAA AAAGCTGTTC GTCGGACCCC GGTTCCGCCG AATCCGTCAG
CAGCTTGGCC TGTCGCAGAC CCAGATCGCC GAGGGACTGG GGATCTCGCC GAGCTATATC
AACCTGATCG AGCGGAACCA ACGGCCGGTG ACCGCACAGA TCCTGCTGCG ATTGGCGGAA
ACCTACGACC TCGATCTGCG CGACCTCGCC ACCGCCGACG AGGACCGGTT CTTCGCCGAG
CTCAACGAAA TCTTTTCGGA CCCGCTGTTC CGCCAGATCG ACCTGCCGAA GCAGGAGCTG
CGCGACCTCG CAGAGCTTTG CCCCGGCGTC ACCCATTCAC TCCAGCGGCT TTACGCCGCC
TACACCGAGG CGCGGCGCGG CGAAACGATG GTCGCGGCGC AGATGGCCGA CCGCGAACAG
ATCCGCTACG AGGCCAACCC GATCGAGCGC GTTCGCGATC TGATCGAGGC CAACCGCAAC
TATTTTCCGG AGCTGGAGCA GGCGGCGGAA GCGGTGCGCG ACGAACTCAA CGTCAGTTCG
CAGGATGTCT ACGGCGCGCT CGACGACCGC CTGCGCGAGC GCCACGCGAT CACAACCCGG
ATCATGCCGG TCGACGTGAT GCGGGAGACG CTGCGCCGGT TCGACCGCCA CCGCCGGCAA
TTGCTGATCT CGGAATTGAT CGACGGGCCG GGCCGCGCCT TCCAGATCGC GTTCCAGACC
GGCCTCAGCG AGCATGGCGG CGTGATCGAC GCCATCGTGC ACCGCTCCGG CGCGCTCGAC
GAGCCGGCGC GGCGGCTGTA CCGCATCACC CTCGGCAACT ACTTCGCCGC CGCGGTGATG
ATGCCCTACG CCGCGTTCCT CACCGCCGCG GAGCAGCTCA GCTACGACGT CAACGTGCTG
GCGCAGCGCT TCAACGCCGG TTTCGAACAG GTCTGCCACC GCCTCACTAC GCTGCAGCGG
CCGAACGCGC GCGGCGTGCC GTTCTTCCTG CTGCGGGTCG ACAATGCCGG TAACGTCTCC
AAGCGTTTCT CCTCCGGCAC CTTCCCGTTC TCGAAATTCG GCGGCACCTG CCCGTTGTGG
AACGTGCACT CGACCTTCGA CACGCCGGAT CGCCTCCTGA AGCAGGTGAT CGAACTGCCC
GACGGCAGCC GCTACTTCTC GATCGCCCAG ATGGTCCGCC GGCCGGTAGC GCCGCATCCG
CAACCGCAGC CGCGCTTCGC GCTCGGCCTC GGCTGCGAAA TCCGCCACGC CGCCAAACTG
ATCTACGCCG CCGGGATGGA TCTGGAGAAA GCCGAAGGCA CCCCGATCGG CGTCAACTGC
CGCCTCTGCG AACGCGAACA CTGCAGCCAG CGCGCCGAGC CGCCGATCAC CCGGACGCTG
ATCCTGGACG AGAACACAAG GCGAGCGAGC AGCTTTGCGT TCAGCAATGC GCGGGAGTTG
TGA
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| Protein sequence | MAGESGKKLF VGPRFRRIRQ QLGLSQTQIA EGLGISPSYI NLIERNQRPV TAQILLRLAE
TYDLDLRDLA TADEDRFFAE LNEIFSDPLF RQIDLPKQEL RDLAELCPGV THSLQRLYAA
YTEARRGETM VAAQMADREQ IRYEANPIER VRDLIEANRN YFPELEQAAE AVRDELNVSS
QDVYGALDDR LRERHAITTR IMPVDVMRET LRRFDRHRRQ LLISELIDGP GRAFQIAFQT
GLSEHGGVID AIVHRSGALD EPARRLYRIT LGNYFAAAVM MPYAAFLTAA EQLSYDVNVL
AQRFNAGFEQ VCHRLTTLQR PNARGVPFFL LRVDNAGNVS KRFSSGTFPF SKFGGTCPLW
NVHSTFDTPD RLLKQVIELP DGSRYFSIAQ MVRRPVAPHP QPQPRFALGL GCEIRHAAKL
IYAAGMDLEK AEGTPIGVNC RLCEREHCSQ RAEPPITRTL ILDENTRRAS SFAFSNAREL
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