| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4004 |
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| Symbol | |
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| ID | 4024521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4449264 |
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| End bp | 4450067 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637964207 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_571124 |
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| Protein GI | 91978465 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.894756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGC AGTATTCGAC CGCATCGATG CTCCGGAACG TTGCGCGCGC AGGCGTGCTG
GCGGCGGTTG CGTCGCTGCT GCTGTGCGGG CCGGGCTTCG CCGCTGCGGA TGGCGGACTG
CTGCCGCGCG ATCTGTCACC CTGGGGCATG TTCAAGAACG CCGACATCGT CGTGAAAATC
GTGATGACCG GCCTCGCTGT GGCGTCGCTT GCGACCTGGA CGGTGTGGCT CTCGAAGACC
ATCGAGCTGC GCCACGAAAC CGCCCGCGCC CGCGATGGTC TGGCGAAGCT CGAGGCCGAC
ACCACGCTCG CCGAGCTGCG CAGCGCCGAC GAGGCGCACG ACGCGGTTGC GCAACTGGTG
CAAACCGCGG CGCGCGAAGC GAGCCTCTCC GGCTGGACCT TCGACGACGA CTTCAAGGAT
CGCGTCGGGC TTCGGCTCGA GCGCGTCGAG GCGGCGATGT CGCGACGGAT CGCGCGCGGC
ACCGGCATTC TGGCGACGAT CGGCGCGGTG GCGCCGTTCG TCGGGCTGTT CGGCACCGTC
TGGGGCATCA TGAACGCCTT CATCGGCATT TCGGAGGCGC ATACCACCAA CCTCGCGGTG
GTCGCGCCCG GTATTGCCGA AGCACTGCTC GCCACCGCGC TCGGCCTCGT CGCCGCGGTG
CCGGCGGTGG TGATCTACAA TTATCTGGTC CGGCAGATCG CCAATTATCG CGCGTTGCTC
GGCGACGCCT CGGCACAGGT GCTGCTGCTG GTCAGCCGAG ATCGCGGCCG CTCGGCGCGA
CTGATGGCGC GGGCCGCGGA GTAG
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| Protein sequence | MMQQYSTASM LRNVARAGVL AAVASLLLCG PGFAAADGGL LPRDLSPWGM FKNADIVVKI
VMTGLAVASL ATWTVWLSKT IELRHETARA RDGLAKLEAD TTLAELRSAD EAHDAVAQLV
QTAAREASLS GWTFDDDFKD RVGLRLERVE AAMSRRIARG TGILATIGAV APFVGLFGTV
WGIMNAFIGI SEAHTTNLAV VAPGIAEALL ATALGLVAAV PAVVIYNYLV RQIANYRALL
GDASAQVLLL VSRDRGRSAR LMARAAE
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