Gene RPD_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3975 
Symbol 
ID4024492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4424965 
End bp4425204 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content61% 
IMG OID637964178 
Producthypothetical protein 
Protein accessionYP_571095 
Protein GI91978436 
COG category[S] Function unknown 
COG ID[COG3514] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CGGAGATCGA GGCTGCGGTC GCCAGCGATC CCGATTGGGC CGGGACCGAG 
GATATCGACT GGTCCAAGGC CAAGCTGATC ATGCCCGCCG CAAAGAAGGC GATCTCGATC
AGGCTCGACG AGGACGTGCT TGATTTCTTC AAGCGTGAAG GGGCGGGCTA TCAGCGCCGA
ATCAATGCGG TGCTGCGATC CTATATGGAG CAGATGGGCA AGCCGAAGCG GCGTGCCTGA
 
Protein sequence
MTETEIEAAV ASDPDWAGTE DIDWSKAKLI MPAAKKAISI RLDEDVLDFF KREGAGYQRR 
INAVLRSYME QMGKPKRRA