| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3965 |
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| Symbol | |
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| ID | 4024482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4413018 |
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| End bp | 4413836 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964168 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_571085 |
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| Protein GI | 91978426 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.199741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACC TGCGCCTTGC CCTCAAGATC TGCGCCGTCG GCGGCGCGCT GCTCGCTGCC
GCGCCTGCGC AGGCTGCGCG TTGCGGCGGT GATTTCAACA CCTTCATGTC CGCCTTCTCG
GCCGAAGCCG CGCAAGCGGG GGTTTCGCAA GGCGTGATCT CGCAGGCGCT CGGCGGCGTC
ACGCCCGATC CGGCGGTGCT GGCGTTCGAC CGCCGGCAGC GCGGCACCTT CAACAAGACC
TTCGAGCAAT ATGTCGCGAC CCGGGTCGGG CCGGGCCGGA TCAAGACCGG GCGCGCGATG
CTGCAGCGGC ACGCGTCGCT GCTGTCCCGG ATCGAGCGGC AGTTCGGCGT GCCGCCGCAG
ATCGTGGTGG CGATCTGGGG CCTCGAATCC GATTTCGGCA AGGGCGACAT CGGCAAGCTG
CCGGTGTTTC GCGTGCTCGC GACAATGGCG CATGATTGCC GCCGCACCGA GCTGTTTCAG
GGCGAATTGC TGGCGGCGCT GAAGATCGTG CAGCGCGGCG ACCTCGAGCT GCGCGACATG
GTCGGCGCCT ATGCGGGCGA GCTCGGCCAG ACCCAGTTCC TGCCGTCGTC CTACATCAAA
TACGGCGTCG ACTTCGACGG CAACGGCCAT GTCGACCTGC GCCACAGCGT GCCGGACGTG
CTGGCCTCGA CCGCCAATCT GCTGAAGACC GCGGGCTGGC GTGCCGGCGG CTCCTATGAA
GAAGGCACGC CGAATTTCGA GGCGATGCGC GAATGGAATC GCGCGCTGGT CTATCGCAAG
ACCATCGGAT ATTTCGCCGA TCAACTCGTC GGGCAGTGA
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| Protein sequence | MPNLRLALKI CAVGGALLAA APAQAARCGG DFNTFMSAFS AEAAQAGVSQ GVISQALGGV
TPDPAVLAFD RRQRGTFNKT FEQYVATRVG PGRIKTGRAM LQRHASLLSR IERQFGVPPQ
IVVAIWGLES DFGKGDIGKL PVFRVLATMA HDCRRTELFQ GELLAALKIV QRGDLELRDM
VGAYAGELGQ TQFLPSSYIK YGVDFDGNGH VDLRHSVPDV LASTANLLKT AGWRAGGSYE
EGTPNFEAMR EWNRALVYRK TIGYFADQLV GQ
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