Gene RPD_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3935 
Symbol 
ID4024451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4374600 
End bp4374956 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content61% 
IMG OID637964139 
Productputative transposase 
Protein accessionYP_571057 
Protein GI91978398 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAG GCCGCGATAC GCTATCGAAA TCGGAGACCG TCACAATCGC GGCGGTCGAA 
TCCGGTGTCC CTCTGCTGGT GGAAGCCCGT GAAATCGTCT CGGCGTTCCA TGCCATGATC
CGCAAGAAAT CTCATGCAGA CTTGGACCCC TGGGTCGAGC GGGCCAGCGC GAGCCTGCTC
GCATCGTTCG CCAACGGCGT CACCAGGGAC AAGGCCGCGG TCAGCGCCGC GATCACGTCA
GCATGGTCCA ACGGACAGAC CGAAGGGCAG ATAACAAAGC TCAAGCTCGT CAAGCGTCAG
ATGTACGGGC GCGCCAAGCT CGATCTGCTT CAGGCCAGAC TACTCGGCGC TCCATAA
 
Protein sequence
MTTGRDTLSK SETVTIAAVE SGVPLLVEAR EIVSAFHAMI RKKSHADLDP WVERASASLL 
ASFANGVTRD KAAVSAAITS AWSNGQTEGQ ITKLKLVKRQ MYGRAKLDLL QARLLGAP