| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3924 |
|---|
| Symbol | |
|---|
| ID | 4024440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4363732 |
|---|
| End bp | 4364259 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637964128 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_571046 |
|---|
| Protein GI | 91978387 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0297886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCT CTAGACTGTT CGGTGTCACT GCGGTTGCGC TGGTTGCGTC ATTCGCGAAT
GCGAGCGCGC AAGAGCGGCT GCAGGTCGGT GTGCTCGAAT GCGCCGGCGG CCCGAACGTC
GGCTACGTCA TCGGTTCGAC GACGGAGCTG GAGTGCGTGT TCAAGACCGG CGGTCGCCGG
GCTGATCCTT ATGTCGCGCG CGTCCAGCGC ATCGGCCTCG ACCTCGGCTT CACCCAGAAC
ACCGGCGTTG CCTGGGCGGT CTATGCGCCG ACCCGCCGCA TTGGCCCCGG CGATCTGTCC
GGCTCCTACG GCGGCGTCGG CGCCAACGCC TCGTTCGGCG TCGGCGTCGG TGGCAACCTG
CTGGTCGGCG GCTCGGCGAA TTCGTTCGCG CTGCAGCCCC TCAGCCTGCA GGGCCAGACC
GGCCTGAACG CAACGGCCGG CATCGTCGAC GTGCAGCTTC GCCCGGCTGA TTTTGGTCCG
CAGCGGAAGT ACCGCAAGCA CAAGCGCAAC CATCGCCAGC ACCGCTGA
|
|---|
| Protein sequence | MSISRLFGVT AVALVASFAN ASAQERLQVG VLECAGGPNV GYVIGSTTEL ECVFKTGGRR
ADPYVARVQR IGLDLGFTQN TGVAWAVYAP TRRIGPGDLS GSYGGVGANA SFGVGVGGNL
LVGGSANSFA LQPLSLQGQT GLNATAGIVD VQLRPADFGP QRKYRKHKRN HRQHR
|
|---|
| |